Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr12 15134390 . G A CCDS8672.1:NM_006205.2:c.232Gct>Act_NP_006196.1:p.78A>T Homo sapiens phosphodiesterase 6H (PDE6H), mRNA.
pdb_id: 
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label_seq_id: 
label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6mzb 3 P04972 94.2 6e-45 EM
 2019-03-06 ALA C:82 C:82 61.0 0.53 H -61.1 -26.4 47.0 0.409 0.121 B:P11541:0.122
ALA D:82 D:82 40.0 0.348 T -70.4 -22.4 35.0 0.304 0.044 A:P23439:0.043
7jsn 4 P04972 94.2 6e-45 EM
 2020-10-21 ALA E:82 NA:NA DO NA DO DO DO NA NA NA
ALA F:82 NA:NA DO NA DO DO DO NA NA NA
2ju4 1 P04972 84.06 4e-40 NMR
 2007-10-16 ALA A:82 A:82 76.0 0.661 G -67.6 12.5 76.0 0.661 0.0 RCY
RCY
RCY
 3.224
1.287
2.821
 HB1
HB1
HB1
 C1Z
O1J
O1G
1fqj 3 P04972 92.86 1e-24 X-RAY
 2001-02-28 ALA C:37 C:82 61.0 0.53 H -73.5 -45.9 51.0 0.443 0.087 A:P04695+P10824:0.087
 HOH
 4.388
 CB
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q13956-f1 1 Q13956 100.0 7e-58 ALA A:78 A:78 61.0 0.53 H -66.2 -36.4
af-p18545-f1 1 P18545 94.2 3e-45 ALA A:82 A:82 60.0 0.522 H -65.8 -35.4