Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr12 24985659 . C A CCDS44845.1:NM_005504.6:c.1042Gag>Tag_NP_005495.2:p.348E>* Homo sapiens branched chain amino acid transaminase 1 (BCAT1), transcript variant 1, mRNA.
pdb_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2cog 1 P54687 99.74 0.0 X-RAY
 2005-08-30 GLU A:348 A:348 120.0 0.632 E -105.2 133.6 120.0 0.632 0.0 HOH
 3.175
 OE1
 O
GLU B:348 B:348 109.0 0.574 E -96.8 163.9 109.0 0.574 0.0 HOH
 2.824
 OE2
 O
2coi 1 P54687 99.74 0.0 X-RAY
 2005-08-30 GLU A:348 A:348 133.0 0.7 S 179.4 128.8 133.0 0.7 0.0 HOH
 2.940
 OE2
 O
GLU B:348 B:348 121.0 0.637 S -135.4 153.7 121.0 0.637 0.0 HOH
 3.070
 CB
 O
2coj 1 P54687 99.74 0.0 X-RAY
 2005-08-30 GLU A:348 A:348 120.0 0.632 E -109.8 142.8 120.0 0.632 0.0 HOH
 2.484
 OE2
 O
GLU B:348 B:348 115.0 0.605 S -121.2 169.4 115.0 0.605 0.0
2abj 1 P54687 98.91 0.0 X-RAY
 2006-06-27 GLU A:328 A:346 133.0 0.7 E -107.8 155.6 133.0 0.7 0.0 HOH
 2.636
 OE2
 O
GLU B:328 D:346 97.0 0.511 E -90.4 152.3 97.0 0.511 0.0 HOH
 2.742
 O
 O
GLU C:328 G:346 118.0 0.621 E -99.7 148.4 NA NA NA
GLU D:328 J:346 135.0 0.711 E -107.8 156.3 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p54687-f1 1 P54687 100.0 0.0 GLU A:348 A:348 138.0 0.726 E -110.2 138.9