Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr12 24989492 . G A CCDS44845.1:NM_005504.6:c.856Ctt>Ttt_NP_005495.2:p.286L>F Homo sapiens branched chain amino acid transaminase 1 (BCAT1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2cog 1 P54687 99.74 0.0 X-RAY
 2005-08-30 LEU A:286 A:286 8.0 0.047 -77.5 124.4 8.0 0.047 0.0 PLP
4MV
HOH
 3.621
7.911
3.349
 CD2
CD2
CD1
 C4
CA
O
LEU B:286 B:286 8.0 0.047 -79.3 125.7 8.0 0.047 0.0 PLP
4MV
HOH
 3.565
7.597
3.377
 CD1
CD2
CD1
 O3
CA
O
2coi 1 P54687 99.74 0.0 X-RAY
 2005-08-30 LEU A:286 A:286 9.0 0.053 -78.3 130.5 9.0 0.053 0.0 PLP
GBN
HOH
 3.439
7.369
3.305
 CD1
CD1
CD1
 O3
C6R
O
LEU B:286 B:286 8.0 0.047 -84.5 130.2 8.0 0.047 0.0 PLP
GBN
HOH
 3.463
7.450
3.501
 CD2
CD2
CD1
 C4
C3
O
2coj 1 P54687 99.74 0.0 X-RAY
 2005-08-30 LEU A:286 A:286 8.0 0.047 -89.2 123.4 8.0 0.047 0.0 PLP
GBN
HOH
 3.301
7.247
5.157
 CD1
CD1
N
 O3
C6R
O
LEU B:286 B:286 8.0 0.047 -84.7 129.1 8.0 0.047 0.0 PLP
GBN
HOH
 3.337
7.182
5.720
 CD1
CD1
O
 O3
C6R
O
2abj 1 P54687 98.91 0.0 X-RAY
 2006-06-27 LEU A:266 A:284 12.0 0.071 -75.2 123.5 12.0 0.071 0.0 CBC
PLP
HOH
 6.683
3.539
3.898
 CD1
CB
CD2
 O38
C2
O
LEU B:266 D:284 12.0 0.071 -72.4 123.5 12.0 0.071 0.0 CBC
PLP
HOH
 6.715
3.539
4.022
 CD1
CB
CD2
 O38
C2
O
LEU C:266 G:284 11.0 0.065 -72.8 123.6 NA NA NA
LEU D:266 J:284 11.0 0.065 -69.4 124.0 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p54687-f1 1 P54687 100.0 0.0 LEU A:286 A:286 13.0 0.076 -70.2 125.7