Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr12 24995075 . T A CCDS44845.1:NM_005504.6:c.758cAt>cTt_NP_005495.2:p.253H>L Homo sapiens branched chain amino acid transaminase 1 (BCAT1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2cog 1 P54687 99.74 0.0 X-RAY
 2005-08-30 HIS A:253 A:253 59.0 0.303 T 46.9 58.8 59.0 0.303 0.0 HOH
 2.942
 ND1
 O
HIS B:253 B:253 51.0 0.262 T 53.7 62.9 51.0 0.262 0.0 HOH
 2.807
 ND1
 O
2coi 1 P54687 99.74 0.0 X-RAY
 2005-08-30 HIS A:253 A:253 52.0 0.267 T 48.6 62.4 52.0 0.267 0.0 HOH
 3.049
 NE2
 O
HIS B:253 B:253 45.0 0.231 T 52.9 62.1 45.0 0.231 0.0 HOH
 2.953
 ND1
 O
2coj 1 P54687 99.74 0.0 X-RAY
 2005-08-30 HIS A:253 A:253 51.0 0.262 T 44.9 58.4 51.0 0.262 0.0 HOH
 6.822
 O
 O
HIS B:253 B:253 44.0 0.226 T 53.3 54.6 44.0 0.226 0.0 HOH
 3.515
 CB
 O
2abj 1 P54687 98.91 0.0 X-RAY
 2006-06-27 HIS A:233 A:251 59.0 0.303 T 57.9 57.2 59.0 0.303 0.0 HOH
 2.704
 CD2
 O
HIS B:233 D:251 49.0 0.251 T 55.6 57.9 49.0 0.251 0.0 HOH
 2.687
 ND1
 O
HIS C:233 G:251 62.0 0.318 T 56.9 56.8 NA NA NA
HIS D:233 J:251 60.0 0.308 T 55.6 58.2 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p54687-f1 1 P54687 100.0 0.0 HIS A:253 A:253 40.0 0.205 T 53.7 50.2