Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr12 24995087 . T A CCDS44845.1:NM_005504.6:c.746tAt>tTt_NP_005495.2:p.249Y>F Homo sapiens branched chain amino acid transaminase 1 (BCAT1), transcript variant 1, mRNA.
pdb_id: 
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label_seq_id: 
label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2cog 1 P54687 99.74 0.0 X-RAY
 2005-08-30 TYR A:249 A:249 34.0 0.148 E -139.6 138.8 34.0 0.148 0.0 HOH
 3.289
 C
 O
TYR B:249 B:249 52.0 0.226 E -139.4 136.9 23.0 0.1 0.126 A:P54687:0.126
 HOH
 3.483
 C
 O
2coi 1 P54687 99.74 0.0 X-RAY
 2005-08-30 TYR A:249 A:249 35.0 0.152 E -144.2 140.6 35.0 0.152 0.0 HOH
 2.537
 OH
 O
TYR B:249 B:249 51.0 0.222 E -139.0 139.9 22.0 0.096 0.126 A:P54687:0.126
 HOH
 2.399
 OH
 O
2coj 1 P54687 99.74 0.0 X-RAY
 2005-08-30 TYR A:249 A:249 23.0 0.1 E -144.6 138.8 23.0 0.1 0.0 HOH
 3.912
 OH
 O
TYR B:249 B:249 53.0 0.23 E -141.7 142.6 22.0 0.096 0.134 A:P54687:0.135
 HOH
 3.528
 CD1
 O
2abj 1 P54687 98.91 0.0 X-RAY
 2006-06-27 TYR A:229 A:247 51.0 0.222 E -137.1 134.3 21.0 0.091 0.131 B:P54687:0.13
 HOH
 2.634
 OH
 O
TYR B:229 D:247 36.0 0.157 E -136.2 135.2 36.0 0.157 0.0 HOH
 2.666
 OH
 O
TYR C:229 G:247 35.0 0.152 E -135.2 138.1 NA NA NA
TYR D:229 J:247 54.0 0.235 E -148.5 137.2 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p54687-f1 1 P54687 100.0 0.0 TYR A:249 A:249 51.0 0.222 E -143.2 145.7