Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr12 25002738 . C A CCDS44845.1:NM_005504.6:c.656gGg>gTg_NP_005495.2:p.219G>V Homo sapiens branched chain amino acid transaminase 1 (BCAT1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2cog 1 P54687 99.74 0.0 X-RAY
 2005-08-30 GLY A:219 A:219 1.0 0.013 T -57.7 -18.9 1.0 0.013 0.0 PLP
HOH
 5.438
2.512
 O
N
 C2A
O
GLY B:219 B:219 0.0 0.0 T -63.8 -7.7 0.0 0.0 0.0 PLP
HOH
 5.401
2.672
 O
N
 C2A
O
2coi 1 P54687 99.74 0.0 X-RAY
 2005-08-30 GLY A:219 A:219 1.0 0.013 T -53.3 -19.0 1.0 0.013 0.0 PLP
HOH
 5.291
2.638
 O
N
 C2A
O
GLY B:219 B:219 0.0 0.0 T -60.6 -6.5 0.0 0.0 0.0 PLP
HOH
 5.223
2.640
 O
N
 C2A
O
2coj 1 P54687 99.74 0.0 X-RAY
 2005-08-30 GLY A:219 A:219 2.0 0.027 T -53.7 -26.8 2.0 0.027 0.0 PLP
HOH
 5.181
2.653
 O
N
 C2A
O
GLY B:219 B:219 1.0 0.013 T -60.8 -16.2 1.0 0.013 0.0 PLP
HOH
 5.352
3.882
 O
N
 C2A
O
2abj 1 P54687 98.91 0.0 X-RAY
 2006-06-27 GLY A:199 A:217 0.0 0.0 T -64.4 -19.3 0.0 0.0 0.0 CBC
PLP
HOH
 9.620
5.425
2.915
 O
O
N
 C44
C2A
O
GLY B:199 D:217 0.0 0.0 T -66.2 -16.7 0.0 0.0 0.0 CBC
PLP
HOH
 9.755
5.431
2.648
 O
O
N
 C44
C2A
O
GLY C:199 G:217 1.0 0.013 T -68.0 -17.5 NA NA NA
GLY D:199 J:217 0.0 0.0 T -61.5 -21.1 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p54687-f1 1 P54687 100.0 0.0 GLY A:219 A:219 0.0 0.0 T -64.1 -20.8