Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr12 25002865 . T A CCDS44845.1:NM_005504.6:c.529Aag>Tag_NP_005495.2:p.177K>* Homo sapiens branched chain amino acid transaminase 1 (BCAT1), transcript variant 1, mRNA.
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2cog 1 P54687 99.74 0.0 X-RAY
 2005-08-30 LYS A:177 A:177 139.0 0.695 -49.5 124.9 107.0 0.535 0.16 B:P54687:0.16
 HOH
 3.223
 NZ
 O
LYS B:177 B:177 116.0 0.58 -62.9 126.4 93.0 0.465 0.115 A:P54687:0.115
 HOH
 2.600
 NZ
 O
2coi 1 P54687 99.74 0.0 X-RAY
 2005-08-30 LYS A:177 A:177 137.0 0.685 -56.3 125.8 107.0 0.535 0.15 B:P54687:0.15
 HOH
 3.348
 NZ
 O
LYS B:177 B:177 125.0 0.625 -59.5 126.0 101.0 0.505 0.12 A:P54687:0.12
 HOH
 2.597
 O
 O
2coj 1 P54687 99.74 0.0 X-RAY
 2005-08-30 LYS A:177 A:177 121.0 0.605 -52.6 123.4 93.0 0.465 0.14 B:P54687:0.14
 HOH
 2.821
 NZ
 O
LYS B:177 B:177 122.0 0.61 -59.4 128.1 101.0 0.505 0.105 A:P54687:0.105
 HOH
 3.032
 NZ
 O
2abj 1 P54687 98.91 0.0 X-RAY
 2006-06-27 LYS A:157 A:175 147.0 0.735 -48.9 126.1 120.0 0.6 0.135 B:P54687:0.135
 HOH
 2.583
 O
 O
LYS B:157 D:175 124.0 0.62 -47.7 124.6 97.0 0.485 0.135 A:P54687:0.135
 HOH
 2.719
 O
 O
LYS C:157 G:175 141.0 0.705 -47.1 126.3 NA NA NA
LYS D:157 J:175 147.0 0.735 -50.3 126.0 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p54687-f1 1 P54687 100.0 0.0 LYS A:177 A:177 133.0 0.665 -52.6 128.0