Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr12 25031537 . T A CCDS44845.1:NM_005504.6:c.437aAa>aTa_NP_005495.2:p.146K>I Homo sapiens branched chain amino acid transaminase 1 (BCAT1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2cog 1 P54687 99.74 0.0 X-RAY
 2005-08-30 LYS A:146 A:146 108.0 0.54 H -61.3 -43.0 108.0 0.54 0.0 HOH
 6.083
 CB
 O
LYS B:146 B:146 123.0 0.615 H -59.9 -44.7 123.0 0.615 0.0 HOH
 3.597
 CD
 O
2coi 1 P54687 99.74 0.0 X-RAY
 2005-08-30 LYS A:146 A:146 106.0 0.53 H -64.6 -47.0 106.0 0.53 0.0 HOH
 3.199
 O
 O
LYS B:146 B:146 119.0 0.595 H -62.4 -44.4 119.0 0.595 0.0 HOH
 2.958
 CE
 O
2coj 1 P54687 99.74 0.0 X-RAY
 2005-08-30 LYS A:146 A:146 103.0 0.515 H -47.4 -48.1 103.0 0.515 0.0 HOH
 3.564
 O
 O
LYS B:146 B:146 132.0 0.66 H -56.6 -44.8 132.0 0.66 0.0 HOH
 3.226
 O
 O
2abj 1 P54687 98.91 0.0 X-RAY
 2006-06-27 LYS A:126 A:144 95.0 0.475 H -59.0 -41.1 95.0 0.475 0.0 HOH
 3.411
 NZ
 O
LYS B:126 D:144 109.0 0.545 H -58.4 -50.6 109.0 0.545 0.0 HOH
 2.786
 O
 O
LYS C:126 G:144 94.0 0.47 H -58.0 -46.9 NA NA NA
LYS D:126 J:144 97.0 0.485 H -58.4 -43.8 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p54687-f1 1 P54687 100.0 0.0 LYS A:146 A:146 75.0 0.375 H -66.0 -42.8