Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr12 25031555 . C A CCDS44845.1:NM_005504.6:c.419tGt>tTt_NP_005495.2:p.140C>F Homo sapiens branched chain amino acid transaminase 1 (BCAT1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2cog 1 P54687 99.74 0.0 X-RAY
 2005-08-30 CYS A:140 A:140 0.0 0.0 H -63.5 -37.7 0.0 0.0 0.0 HOH
 6.590
 N
 O
CYS B:140 B:140 0.0 0.0 H -66.9 -36.2 0.0 0.0 0.0 HOH
 7.102
 SG
 O
2coi 1 P54687 99.74 0.0 X-RAY
 2005-08-30 CYS A:140 A:140 0.0 0.0 H -61.3 -39.6 0.0 0.0 0.0 HOH
 6.654
 O
 O
CYS B:140 B:140 0.0 0.0 H -68.7 -39.0 0.0 0.0 0.0 HOH
 5.947
 N
 O
2coj 1 P54687 99.74 0.0 X-RAY
 2005-08-30 CYS A:140 A:140 0.0 0.0 H -58.9 -30.2 0.0 0.0 0.0 HOH
 6.846
 N
 O
CYS B:140 B:140 0.0 0.0 H -62.6 -44.8 0.0 0.0 0.0 HOH
 7.669
 SG
 O
2abj 1 P54687 98.91 0.0 X-RAY
 2006-06-27 CYS A:120 A:138 0.0 0.0 H -64.5 -40.4 0.0 0.0 0.0 HOH
 6.854
 O
 O
CYS B:120 D:138 0.0 0.0 H -64.1 -39.3 0.0 0.0 0.0 HOH
 5.866
 N
 O
CYS C:120 G:138 0.0 0.0 H -60.5 -41.0 NA NA NA
CYS D:120 J:138 0.0 0.0 H -61.9 -40.3 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p54687-f1 1 P54687 100.0 0.0 CYS A:140 A:140 0.0 0.0 H -59.2 -39.7