Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr12 25031570 . T A CCDS44845.1:NM_005504.6:c.404gAa>gTa_NP_005495.2:p.135E>V Homo sapiens branched chain amino acid transaminase 1 (BCAT1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2cog 1 P54687 99.74 0.0 X-RAY
 2005-08-30 GLU A:135 A:135 114.0 0.6 H -59.3 -41.9 114.0 0.6 0.0 HOH
 3.378
 CG
 O
GLU B:135 B:135 142.0 0.747 H -69.8 -37.1 142.0 0.747 0.0 MG
HOH
 5.097
3.173
 OE1
OE1
 MG
O
2coi 1 P54687 99.74 0.0 X-RAY
 2005-08-30 GLU A:135 A:135 111.0 0.584 H -60.0 -47.6 111.0 0.584 0.0 HOH
 2.433
 OE1
 O
GLU B:135 B:135 146.0 0.768 H -66.9 -35.4 146.0 0.768 0.0 MG
HOH
 4.761
2.697
 OE1
O
 MG
O
2coj 1 P54687 99.74 0.0 X-RAY
 2005-08-30 GLU A:135 A:135 118.0 0.621 H -69.6 -41.9 118.0 0.621 0.0 HOH
 4.074
 O
 O
GLU B:135 B:135 139.0 0.732 H -70.4 -29.8 139.0 0.732 0.0 MG
HOH
 5.488
2.907
 OE1
OE2
 MG
O
2abj 1 P54687 98.91 0.0 X-RAY
 2006-06-27 GLU A:115 A:133 110.0 0.579 H -75.9 -33.1 110.0 0.579 0.0 HOH
 3.273
 CG
 O
GLU B:115 D:133 144.0 0.758 H -63.9 -35.2 144.0 0.758 0.0 HOH
 2.760
 O
 O
GLU C:115 G:133 150.0 0.789 H -65.4 -34.4 NA NA NA
GLU D:115 J:133 109.0 0.574 H -72.6 -32.9 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p54687-f1 1 P54687 100.0 0.0 GLU A:135 A:135 113.0 0.595 H -73.0 -39.2