Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr12 25034260 . C A CCDS44845.1:NM_005504.6:c.365cGc>cTc_NP_005495.2:p.122R>L Homo sapiens branched chain amino acid transaminase 1 (BCAT1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2cog 1 P54687 99.74 0.0 X-RAY
 2005-08-30 ARG A:122 A:122 55.0 NA H -59.5 -39.6 55.0 NA NA HOH
 3.811
 CA
 O
ARG B:122 B:122 165.0 0.733 H -61.6 -42.0 165.0 0.733 0.0 HOH
 3.028
 O
 O
2coi 1 P54687 99.74 0.0 X-RAY
 2005-08-30 ARG A:122 A:122 55.0 NA H -62.7 -30.7 55.0 NA NA HOH
 3.581
 CB
 O
ARG B:122 B:122 163.0 0.724 H -63.4 -42.6 163.0 0.724 0.0 HOH
 2.810
 NH2
 O
2coj 1 P54687 99.74 0.0 X-RAY
 2005-08-30 ARG A:122 A:122 56.0 NA H -51.2 -35.4 56.0 NA NA HOH
 7.315
 CB
 O
ARG B:122 B:122 165.0 0.733 H -67.2 -34.1 165.0 0.733 0.0 HOH
 6.694
 N
 O
2abj 1 P54687 98.91 0.0 X-RAY
 2006-06-27 ARG A:102 A:120 158.0 0.702 H -63.3 -39.9 158.0 0.702 0.0 HOH
 2.658
 O
 O
ARG B:102 D:120 96.0 0.427 H -55.4 -45.5 96.0 0.427 0.0 PLP
HOH
 9.300
2.892
 NH2
NH1
 O3P
O
ARG C:102 G:120 96.0 0.427 H -56.1 -44.3 NA NA NA
ARG D:102 J:120 167.0 0.742 H -64.8 -40.0 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p54687-f1 1 P54687 100.0 0.0 ARG A:122 A:122 121.0 0.538 H -58.9 -43.5