Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr12 25034266 . A C CCDS44845.1:NM_005504.6:c.359aTg>aGg_NP_005495.2:p.120M>R Homo sapiens branched chain amino acid transaminase 1 (BCAT1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2cog 1 P54687 99.74 0.0 X-RAY
 2005-08-30 MET A:120 A:120 0.0 0.0 H -60.6 -37.6 0.0 0.0 0.0 PLP
HOH
 9.530
3.439
 N
CA
 O2P
O
MET B:120 B:120 1.0 0.005 H -64.4 -35.9 1.0 0.005 0.0 PLP
HOH
 9.482
3.256
 N
CA
 O2P
O
2coi 1 P54687 99.74 0.0 X-RAY
 2005-08-30 MET A:120 A:120 0.0 0.0 H -61.2 -39.8 0.0 0.0 0.0 PLP
HOH
 9.496
3.425
 N
CA
 O2P
O
MET B:120 B:120 0.0 0.0 H -62.0 -38.1 0.0 0.0 0.0 PLP
HOH
 9.531
3.344
 N
CA
 O2P
O
2coj 1 P54687 99.74 0.0 X-RAY
 2005-08-30 MET A:120 A:120 0.0 0.0 H -61.8 -41.5 0.0 0.0 0.0 PLP
HOH
 9.532
6.394
 N
N
 O2P
O
MET B:120 B:120 0.0 0.0 H -59.8 -32.6 0.0 0.0 0.0 PLP
HOH
 9.551
3.116
 N
CA
 O2P
O
2abj 1 P54687 98.91 0.0 X-RAY
 2006-06-27 MET A:100 A:118 0.0 0.0 H -65.3 -42.7 0.0 0.0 0.0 PLP
HOH
 9.836
3.404
 N
CA
 O3P
O
MET B:100 D:118 0.0 0.0 H -58.8 -40.8 0.0 0.0 0.0 PLP
HOH
 9.682
3.429
 N
CA
 O3P
O
MET C:100 G:118 0.0 0.0 H -62.5 -41.2 NA NA NA
MET D:100 J:118 0.0 0.0 H -64.2 -44.2 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p54687-f1 1 P54687 100.0 0.0 MET A:120 A:120 0.0 0.0 H -62.9 -46.8