Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr12 25034278 . T A CCDS44845.1:NM_005504.6:c.347aAc>aTc_NP_005495.2:p.116N>I Homo sapiens branched chain amino acid transaminase 1 (BCAT1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2cog 1 P54687 99.74 0.0 X-RAY
 2005-08-30 ASN A:116 A:116 1.0 0.006 H -65.2 -38.0 1.0 0.006 0.0 PLP
4MV
HOH
 4.854
8.914
2.781
 OD1
OD1
ND2
 O2P
O
O
ASN B:116 B:116 2.0 0.013 H -66.8 -40.6 2.0 0.013 0.0 PLP
4MV
HOH
 4.946
8.969
2.784
 OD1
OD1
ND2
 O2P
O
O
2coi 1 P54687 99.74 0.0 X-RAY
 2005-08-30 ASN A:116 A:116 2.0 0.013 H -65.2 -35.2 2.0 0.013 0.0 PLP
GBN
HOH
 4.721
8.563
2.816
 OD1
OD1
OD1
 O2P
OB
O
ASN B:116 B:116 2.0 0.013 H -73.5 -36.9 2.0 0.013 0.0 PLP
GBN
HOH
 4.843
8.612
2.617
 OD1
OD1
ND2
 O2P
OB
O
2coj 1 P54687 99.74 0.0 X-RAY
 2005-08-30 ASN A:116 A:116 3.0 0.019 H -58.3 -41.1 3.0 0.019 0.0 PLP
GBN
HOH
 4.727
8.382
2.782
 OD1
OD1
OD1
 O2P
OB
O
ASN B:116 B:116 3.0 0.019 H -71.1 -40.8 3.0 0.019 0.0 PLP
GBN
HOH
 4.899
8.678
2.980
 OD1
OD1
ND2
 O2P
OB
O
2abj 1 P54687 98.91 0.0 X-RAY
 2006-06-27 ASN A:96 A:114 2.0 0.013 H -69.4 -36.8 2.0 0.013 0.0 CBC
PLP
HOH
 7.731
4.963
2.733
 OD1
OD1
ND2
 O38
O3P
O
ASN B:96 D:114 2.0 0.013 H -71.0 -38.0 2.0 0.013 0.0 CBC
PLP
HOH
 7.718
4.949
2.730
 OD1
OD1
ND2
 O38
O3P
O
ASN C:96 G:114 2.0 0.013 H -71.9 -35.5 NA NA NA
ASN D:96 J:114 3.0 0.019 H -69.8 -38.7 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p54687-f1 1 P54687 100.0 0.0 ASN A:116 A:116 2.0 0.013 H -74.3 -40.9