Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr12 25034282 . G A CCDS44845.1:NM_005504.6:c.343Ctc>Ttc_NP_005495.2:p.115L>F Homo sapiens branched chain amino acid transaminase 1 (BCAT1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2cog 1 P54687 99.74 0.0 X-RAY
 2005-08-30 LEU A:115 A:115 56.0 0.329 H -76.0 -35.4 56.0 0.329 0.0 PLP
HOH
 7.462
3.109
 CB
CD2
 O2P
O
LEU B:115 B:115 64.0 0.376 H -70.4 -34.4 64.0 0.376 0.0 PLP
HOH
 7.650
2.803
 O
O
 O2P
O
2coi 1 P54687 99.74 0.0 X-RAY
 2005-08-30 LEU A:115 A:115 53.0 0.312 H -72.3 -36.1 53.0 0.312 0.0 PLP
HOH
 7.474
3.308
 CB
CD1
 O2P
O
LEU B:115 B:115 62.0 0.365 H -69.1 -29.8 62.0 0.365 0.0 PLP
HOH
 7.580
3.200
 O
CD2
 O2P
O
2coj 1 P54687 99.74 0.0 X-RAY
 2005-08-30 LEU A:115 A:115 59.0 0.347 H -73.5 -43.0 59.0 0.347 0.0 PLP
HOH
 7.493
3.136
 CB
O
 O2P
O
LEU B:115 B:115 67.0 0.394 H -75.4 -32.1 67.0 0.394 0.0 PLP
HOH
 7.652
4.075
 CB
N
 O2P
O
2abj 1 P54687 98.91 0.0 X-RAY
 2006-06-27 LEU A:95 A:113 57.0 0.335 H -66.7 -36.3 57.0 0.335 0.0 PLP
HOH
 7.494
4.081
 CB
N
 O3P
O
LEU B:95 D:113 54.0 0.318 H -67.6 -33.7 54.0 0.318 0.0 PLP
HOH
 7.316
3.459
 O
CD2
 O3P
O
LEU C:95 G:113 53.0 0.312 H -67.4 -34.6 NA NA NA
LEU D:95 J:113 61.0 0.359 H -66.2 -34.4 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p54687-f1 1 P54687 100.0 0.0 LEU A:115 A:115 54.0 0.318 H -64.2 -30.0