Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr12 25034324 . A C CCDS44845.1:NM_005504.6:c.301Ttt>Gtt_NP_005495.2:p.101F>V Homo sapiens branched chain amino acid transaminase 1 (BCAT1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2cog 1 P54687 99.74 0.0 X-RAY
 2005-08-30 PHE A:101 A:101 6.0 0.029 E -122.3 139.6 6.0 0.029 0.0 HOH
 3.159
 O
 O
PHE B:101 B:101 8.0 0.038 E -126.3 134.8 8.0 0.038 0.0 HOH
 3.068
 O
 O
2coi 1 P54687 99.74 0.0 X-RAY
 2005-08-30 PHE A:101 A:101 5.0 0.024 E -120.2 131.0 5.0 0.024 0.0 HOH
 3.672
 CE2
 O
PHE B:101 B:101 7.0 0.033 E -124.9 138.3 7.0 0.033 0.0 HOH
 3.009
 O
 O
2coj 1 P54687 99.74 0.0 X-RAY
 2005-08-30 PHE A:101 A:101 6.0 0.029 E -122.7 145.2 6.0 0.029 0.0 HOH
 4.415
 CE1
 O
PHE B:101 B:101 5.0 0.024 E -122.0 140.7 5.0 0.024 0.0 HOH
 4.474
 CE1
 O
2abj 1 P54687 98.91 0.0 X-RAY
 2006-06-27 PHE A:81 A:99 5.0 0.024 E -124.6 126.0 5.0 0.024 0.0 HOH
 2.848
 O
 O
PHE B:81 D:99 5.0 0.024 E -128.9 130.8 5.0 0.024 0.0 HOH
 2.869
 O
 O
PHE C:81 G:99 7.0 0.033 E -129.7 124.6 NA NA NA
PHE D:81 J:99 5.0 0.024 E -124.4 128.4 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p54687-f1 1 P54687 100.0 0.0 PHE A:101 A:101 5.0 0.024 E -124.8 129.7