Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr12 25047262 . G A CCDS44845.1:NM_005504.6:c.226Ctt>Ttt_NP_005495.2:p.76L>F Homo sapiens branched chain amino acid transaminase 1 (BCAT1), transcript variant 1, mRNA.
pdb_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2cog 1 P54687 99.74 0.0 X-RAY
 2005-08-30 LEU A:76 A:76 62.0 0.365 -56.3 131.5 44.0 0.259 0.106 B:P54687:0.106
 HOH
 3.322
 CD2
 O
LEU B:76 B:76 61.0 0.359 -53.7 114.5 44.0 0.259 0.1 A:P54687:0.1
 HOH
 2.976
 O
 O
2coi 1 P54687 99.74 0.0 X-RAY
 2005-08-30 LEU A:76 A:76 60.0 0.353 -53.8 125.5 43.0 0.253 0.1 B:P54687:0.1
 HOH
 3.712
 CD2
 O
LEU B:76 B:76 59.0 0.347 -50.6 120.7 41.0 0.241 0.106 A:P54687:0.106
 HOH
 3.689
 CB
 O
2coj 1 P54687 99.74 0.0 X-RAY
 2005-08-30 LEU A:76 A:76 61.0 0.359 -57.1 144.8 43.0 0.253 0.106 B:P54687:0.106
 HOH
 8.413
 O
 O
LEU B:76 B:76 61.0 0.359 S -57.9 117.9 43.0 0.253 0.106 A:P54687:0.106
 HOH
 4.031
 CD2
 O
2abj 1 P54687 98.91 0.0 X-RAY
 2006-06-27 LEU A:56 A:74 62.0 0.365 -55.2 128.7 43.0 0.253 0.112 B:P54687:0.112
 HOH
 3.729
 O
 O
LEU B:56 D:74 59.0 0.347 -57.5 131.2 43.0 0.253 0.094 A:P54687:0.094
 HOH
 2.943
 O
 O
LEU C:56 G:74 60.0 0.353 -56.2 129.4 NA NA NA
LEU D:56 J:74 58.0 0.341 -53.4 131.2 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p54687-f1 1 P54687 100.0 0.0 LEU A:76 A:76 62.0 0.365 -54.7 126.7