Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr12 25047303 . C A CCDS44845.1:NM_005504.6:c.185tGg>tTg_NP_005495.2:p.62W>L Homo sapiens branched chain amino acid transaminase 1 (BCAT1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2cog 1 P54687 99.74 0.0 X-RAY
 2005-08-30 TRP A:62 A:62 36.0 0.141 E -148.2 147.8 36.0 0.141 0.0 HOH
 2.719
 O
 O
TRP B:62 B:62 33.0 0.129 E -124.7 144.1 33.0 0.129 0.0 HOH
 2.763
 O
 O
2coi 1 P54687 99.74 0.0 X-RAY
 2005-08-30 TRP A:62 A:62 37.0 0.145 E -143.3 151.5 37.0 0.145 0.0 HOH
 2.715
 O
 O
TRP B:62 B:62 34.0 0.133 E -137.2 145.1 34.0 0.133 0.0 HOH
 2.799
 O
 O
2coj 1 P54687 99.74 0.0 X-RAY
 2005-08-30 TRP A:62 A:62 27.0 0.106 E -141.8 136.8 27.0 0.106 0.0 HOH
 3.563
 CH2
 O
TRP B:62 B:62 33.0 0.129 E -137.0 147.6 33.0 0.129 0.0 HOH
 3.414
 NE1
 O
2abj 1 P54687 98.91 0.0 X-RAY
 2006-06-27 TRP A:42 A:60 41.0 0.161 E -136.5 147.4 41.0 0.161 0.0 HOH
 2.737
 O
 O
TRP B:42 D:60 33.0 0.129 E -133.1 150.6 33.0 0.129 0.0 HOH
 2.500
 O
 O
TRP C:42 G:60 37.0 0.145 E -136.5 143.8 NA NA NA
TRP D:42 J:60 41.0 0.161 E -137.2 144.3 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p54687-f1 1 P54687 100.0 0.0 TRP A:62 A:62 35.0 0.137 E -137.8 143.9