Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr12 25047306 . T A CCDS44845.1:NM_005504.6:c.182gAg>gTg_NP_005495.2:p.61E>V Homo sapiens branched chain amino acid transaminase 1 (BCAT1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2cog 1 P54687 99.74 0.0 X-RAY
 2005-08-30 GLU A:61 A:61 95.0 0.5 E -84.3 155.7 95.0 0.5 0.0 HOH
 2.611
 OE2
 O
GLU B:61 B:61 85.0 0.447 E -88.8 138.8 85.0 0.447 0.0 HOH
 2.561
 OE1
 O
2coi 1 P54687 99.74 0.0 X-RAY
 2005-08-30 GLU A:61 A:61 85.0 0.447 E -83.2 152.7 85.0 0.447 0.0 HOH
 2.876
 OE2
 O
GLU B:61 B:61 82.0 0.432 E -89.8 146.6 82.0 0.432 0.0 HOH
 2.577
 OE2
 O
2coj 1 P54687 99.74 0.0 X-RAY
 2005-08-30 GLU A:61 A:61 93.0 0.489 E -83.6 148.3 93.0 0.489 0.0 HOH
 2.733
 OE1
 O
GLU B:61 B:61 76.0 0.4 E -93.2 147.4 76.0 0.4 0.0 HOH
 3.156
 OE2
 O
2abj 1 P54687 98.91 0.0 X-RAY
 2006-06-27 GLU A:41 A:59 85.0 0.447 E -85.3 147.2 85.0 0.447 0.0 HOH
 2.677
 OE2
 O
GLU B:41 D:59 75.0 0.395 E -93.8 140.5 75.0 0.395 0.0 HOH
 2.388
 OE1
 O
GLU C:41 G:59 78.0 0.411 E -92.2 148.2 NA NA NA
GLU D:41 J:59 83.0 0.437 E -86.4 147.1 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p54687-f1 1 P54687 100.0 0.0 GLU A:61 A:61 91.0 0.479 E -82.3 150.9