Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr12 25047359 . G A CCDS44845.1:NM_005504.6:c.129gaC>gaT_NP_005495.2:p.43D>D Homo sapiens branched chain amino acid transaminase 1 (BCAT1), transcript variant 1, mRNA.
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2cog 1 P54687 99.74 0.0 X-RAY
 2005-08-30 ASP A:43 A:43 113.0 0.753 -82.3 124.8 113.0 0.753 0.0 HOH
 2.812
 N
 O
ASP B:43 B:43 71.0 0.473 -77.6 123.3 71.0 0.473 0.0 HOH
 2.575
 OD2
 O
2coi 1 P54687 99.74 0.0 X-RAY
 2005-08-30 ASP A:43 A:43 114.0 0.76 -97.2 117.6 114.0 0.76 0.0 HOH
 3.248
 O
 O
ASP B:43 B:43 108.0 0.72 -84.4 125.4 108.0 0.72 0.0 HOH
 3.370
 OD1
 O
2coj 1 P54687 99.74 0.0 X-RAY
 2005-08-30 ASP A:43 A:43 110.0 0.733 -85.4 124.6 110.0 0.733 0.0 HOH
 2.872
 N
 O
ASP B:43 B:43 99.0 0.66 -80.1 117.6 99.0 0.66 0.0 HOH
 6.352
 C
 O
2abj 1 P54687 98.91 0.0 X-RAY
 2006-06-27 ASP A:23 A:41 81.0 0.54 -60.6 118.6 81.0 0.54 0.0 HOH
 2.676
 OD2
 O
ASP B:23 D:41 81.0 0.54 -58.0 117.8 81.0 0.54 0.0 HOH
 2.677
 O
 O
ASP C:23 G:41 80.0 0.533 -62.5 118.3 NA NA NA
ASP D:23 J:41 80.0 0.533 -67.1 119.9 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p54687-f1 1 P54687 100.0 0.0 ASP A:43 A:43 76.0 0.507 -64.3 121.1