Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr12 25054759 . C A CCDS44845.1:NM_005504.6:c.67Ggg>Tgg_NP_005495.2:p.23G>W Homo sapiens branched chain amino acid transaminase 1 (BCAT1), transcript variant 1, mRNA.
pdb_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2cog 1 P54687 99.74 0.0 X-RAY
 2005-08-30 GLY A:23 A:23 43.0 0.573 -168.3 -157.4 43.0 0.573 0.0 HOH
 3.259
 N
 O
GLY B:23 NA:NA DO NA DO DO DO NA NA NA
2coi 1 P54687 99.74 0.0 X-RAY
 2005-08-30 GLY A:23 A:23 44.0 0.587 -177.3 -150.4 44.0 0.587 0.0 HOH
 3.068
 O
 O
GLY B:23 NA:NA DO NA DO DO DO NA NA NA
2coj 1 P54687 99.74 0.0 X-RAY
 2005-08-30 GLY A:23 A:23 47.0 0.627 -156.0 -157.2 47.0 0.627 0.0
GLY B:23 NA:NA DO NA DO DO DO NA NA NA
2abj 1 P54687 98.91 0.0 X-RAY
 2006-06-27 GLY A:3 A:21 61.0 0.813 S -68.4 -25.4 61.0 0.813 0.0 HOH
 2.954
 N
 O
GLY B:3 D:21 60.0 0.8 -59.2 -37.1 60.0 0.8 0.0 HOH
 2.717
 N
 O
GLY C:3 G:21 106.0 1.0 360.0 -29.5 NA NA NA
GLY D:3 J:21 60.0 0.8 S -70.5 -26.1 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p54687-f1 1 P54687 100.0 0.0 GLY A:23 A:23 59.0 0.787 S -69.1 -24.6