Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr12 | 3129932 | . | C | A | CCDS31729.1:NM_003213.3:c.716cCg>cAg_NP_003204.2:p.239P>Q | Homo sapiens TEA domain transcription factor 4 (TEAD4), transcript variant 1, mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 6ge3 | 1 | Q15561 | 100.0 | 3e-166 |
X-RAY |
2018-09-19 | PRO | A:24 | A:239 | 97.0 | 0.669 | T | -44.5 | -27.9 | 97.0 | 0.669 | 0.0 |
HOH |
2.657 |
O |
O |
||
| 6gec | 1 | Q15561 | 100.0 | 3e-166 |
X-RAY |
2018-09-19 | PRO | A:24 | A:239 | 93.0 | 0.641 | T | -51.1 | -23.0 | 93.0 | 0.641 | 0.0 |
HOH |
2.739 |
O |
O |
||
| 6ge5 | 1 | Q15561 | 99.54 | 1e-165 |
X-RAY |
2018-09-19 | PRO | A:24 | A:239 | 97.0 | 0.669 | T | -40.8 | -32.4 | 97.0 | 0.669 | 0.0 |
HOH |
2.697 |
O |
O |
||
| 6geg | 1 | Q15561 | 99.54 | 1e-165 |
X-RAY |
2018-09-19 | PRO | A:24 | A:239 | 98.0 | 0.676 | T | -55.1 | -19.9 | 98.0 | 0.676 | 0.0 |
HOH |
2.757 |
O |
O |
||
| 6gek | 1 | Q15561 | 99.54 | 1e-165 |
X-RAY |
2018-09-19 | PRO | A:24 | A:239 | 96.0 | 0.662 | T | -47.4 | -13.9 | 96.0 | 0.662 | 0.0 |
HOH |
9.290 |
CA |
O |
||
| PRO | C:24 | B:239 | 96.0 | 0.662 | T | -54.7 | -19.4 | NA | NA | NA | |||||||||||||
| 6hik | 1 | Q15561 | 99.54 | 2e-165 |
X-RAY |
2019-04-03 | PRO | A:24 | A:239 | 92.0 | 0.634 | T | -55.7 | -22.5 | 92.0 | 0.634 | 0.0 |
HOH |
7.574 |
C |
O |
||
| 6ge4 | 1 | Q15561 | 99.54 | 2e-165 |
X-RAY |
2018-09-19 | PRO | A:24 | A:239 | 102.0 | 0.703 | T | -53.4 | -28.1 | 102.0 | 0.703 | 0.0 | ||||||
| 6gee | 1 | Q15561 | 99.54 | 2e-165 |
X-RAY |
2018-09-19 | PRO | A:24 | A:239 | 96.0 | 0.662 | T | -52.4 | -22.2 | 96.0 | 0.662 | 0.0 |
HOH |
8.211 |
O |
O |
||
| 5oaq | 1 | Q15561 | 100.0 | 5e-165 |
X-RAY |
2017-10-11 | PRO | A:25 | A:239 | 97.0 | 0.669 | T | -54.0 | -18.6 | 97.0 | 0.669 | 0.0 |
HOH |
7.911 |
O |
O |
||
| 6q2x | 1 | Q15561 | 100.0 | 5e-165 |
X-RAY |
2019-07-03 | PRO | A:25 | A:239 | 95.0 | 0.655 | T | -51.2 | -19.8 | 95.0 | 0.655 | 0.0 |
HOH |
7.843 |
O |
O |
||
| 6q36 | 1 | Q15561 | 100.0 | 5e-165 |
X-RAY |
2019-07-03 | PRO | A:25 | A:239 | 96.0 | 0.662 | T | -54.1 | -16.3 | 48.0 | 0.331 | 0.331 |
B:Q15561:0.331 |
PO4 HOH |
7.039 3.457 |
O CB |
O4 O |
|
| PRO | B:25 | B:239 | 96.0 | 0.662 | T | -58.2 | -15.7 | 45.0 | 0.31 | 0.352 |
A:Q15561:0.352 |
HOH |
6.081 |
CD |
O |
||||||||
| 6ge6 | 1 | Q15561 | 99.09 | 1e-164 |
X-RAY |
2018-09-19 | PRO | A:24 | A:239 | 93.0 | 0.641 | T | -57.0 | -19.0 | 93.0 | 0.641 | 0.0 |
HOH |
8.306 |
O |
O |
||
| 6gei | 1 | Q15561 | 99.09 | 1e-164 |
X-RAY |
2018-09-19 | PRO | A:24 | A:239 | 96.0 | 0.662 | T | -49.4 | -24.5 | 96.0 | 0.662 | 0.0 |
HOH |
7.709 |
C |
O |
||
| 6sen | 1 | Q15561 | 99.54 | 5e-164 |
X-RAY |
2019-11-20 | PRO | A:25 | A:239 | 100.0 | 0.69 | T | -56.7 | -19.4 | 100.0 | 0.69 | 0.0 |
HOH |
6.463 |
CD |
O |
||
| PRO | B:25 | B:239 | 99.0 | 0.683 | T | -59.4 | -19.2 | NA | NA | NA | |||||||||||||
| 6seo | 1 | Q15561 | 99.54 | 5e-164 |
X-RAY |
2019-11-20 | PRO | A:25 | A:239 | 102.0 | 0.703 | S | -66.5 | -26.8 | 102.0 | 0.703 | 0.0 |
HOH |
8.080 |
O |
O |
||
| 4ln0 | 1 | Q62296 | 96.35 | 3e-161 |
X-RAY |
2014-02-26 | PRO | A:27 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
| PRO | B:27 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
| 6l9f | 1 | Q62296 | 96.35 | 3e-161 |
X-RAY |
2019-12-11 | PRO | A:27 | A:232 | 101.0 | 0.697 | T | -55.7 | -18.7 | 101.0 | 0.697 | 0.0 |
HOH |
3.591 |
CB |
O |
||
| PRO | C:27 | B:232 | 96.0 | 0.662 | T | -60.3 | -16.3 | NA | NA | NA | |||||||||||||
| 6sba | 1 | Q62296 | 96.35 | 9e-161 |
X-RAY |
2020-09-30 | PRO | A:26 | A:232 | 53.0 | 0.366 | -65.9 | 360.0 | 53.0 | 0.366 | 0.0 |
GOL HOH |
9.749 3.833 |
CB CD |
H11 O |
|||
| 3jua | 1 | Q62296 | 96.33 | 2e-160 |
X-RAY |
2010-02-23 | PRO | A:25 | A:232 | 75.0 | 0.517 | S | -103.2 | -169.1 | 75.0 | 0.517 | 0.0 |
HOH |
2.961 |
CA |
O |
||
| PRO | C:25 | C:232 | 103.0 | 0.71 | S | -86.0 | -170.6 | NA | NA | NA | |||||||||||||
| PRO | E:25 | E:232 | 115.0 | 0.793 | T | -128.2 | 167.6 | NA | NA | NA | |||||||||||||
| PRO | G:25 | G:232 | 102.0 | 0.703 | S | -68.7 | 102.7 | NA | NA | NA | |||||||||||||
| 5xjd | 1 | Q62296 | 96.33 | 2e-160 |
X-RAY |
2018-01-24 | PRO | A:25 | A:232 | 115.0 | 0.793 | S | -55.3 | -33.6 | 115.0 | 0.793 | 0.0 |
HOH |
6.223 |
O |
O |
||
| PRO | B:25 | B:232 | 113.0 | 0.779 | S | -51.4 | -37.4 | 113.0 | 0.779 | 0.0 |
HOH |
4.131 |
O |
O |
|||||||||
| 5gn0 | 1 | Q62296 | 96.33 | 4e-160 |
X-RAY |
2017-05-31 | PRO | A:30 | A:232 | 120.0 | 0.828 | S | -53.2 | -31.4 | 120.0 | 0.828 | 0.0 | ||||||
| PRO | B:30 | B:232 | 91.0 | 0.628 | S | -61.8 | -40.9 | NA | NA | NA | |||||||||||||
| PRO | C:30 | C:232 | 110.0 | 0.759 | S | -67.5 | -33.1 | NA | NA | NA | |||||||||||||
| PRO | D:30 | D:232 | 88.0 | 0.607 | S | -62.5 | -41.1 | NA | NA | NA | |||||||||||||
| 5z2q | 3 | Q62296 | 96.31 | 1e-159 |
X-RAY |
2018-01-31 | PRO | C:32 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
| 5z2q | 4 | Q62296 | 96.31 | 2e-159 |
X-RAY |
2018-01-31 | PRO | D:34 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
| 7cmm | 1 | P28347 | 81.45 | 8e-139 |
X-RAY |
2021-02-03 | PRO | A:35 | A:231 | 128.0 | 0.883 | T | -61.4 | -15.8 | 128.0 | 0.883 | 0.0 | ||||||
| PRO | B:35 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
| PRO | C:35 | C:231 | 107.0 | 0.738 | T | -59.8 | -28.5 | NA | NA | NA | |||||||||||||
| PRO | D:35 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
| 4re1 | 1 | P28347 | 81.28 | 2e-137 |
X-RAY |
2014-11-19 | PRO | A:25 | A:216 | 121.0 | 0.834 | T | -61.0 | -18.7 | 121.0 | 0.834 | 0.0 |
HOH |
8.111 |
N |
O |
||
| PRO | B:25 | B:216 | 120.0 | 0.828 | T | -57.9 | -16.6 | NA | NA | NA | |||||||||||||
| 6hil | 1 | P28347 | 81.65 | 4e-137 |
X-RAY |
2019-04-03 | PRO | A:24 | A:216 | 96.0 | 0.662 | T | -57.8 | -6.4 | 96.0 | 0.662 | 0.0 |
HOH |
6.680 |
N |
O |
||
| PRO | C:24 | D:216 | 96.0 | 0.662 | T | -65.9 | -7.1 | NA | NA | NA | |||||||||||||
| PRO | E:24 | B:216 | 100.0 | 0.69 | T | -52.8 | -11.2 | NA | NA | NA | |||||||||||||
| PRO | G:24 | C:216 | 97.0 | 0.669 | T | -54.1 | -12.1 | NA | NA | NA | |||||||||||||
| 3kys | 1 | P28347 | 81.65 | 4e-137 |
X-RAY |
2010-02-23 | PRO | A:24 | A:216 | 122.0 | 0.841 | T | -60.5 | -22.0 | 122.0 | 0.841 | 0.0 | ||||||
| PRO | C:24 | C:216 | 128.0 | 0.883 | T | -58.5 | -22.2 | NA | NA | NA | |||||||||||||
| 6im5 | 1 | P28347 | 81.36 | 2e-136 |
X-RAY |
2019-02-06 | PRO | A:38 | A:231 | 96.0 | 0.662 | T | -55.2 | -19.9 | 96.0 | 0.662 | 0.0 |
HOH |
2.996 |
O |
O |
||
| PRO | B:38 | B:231 | 94.0 | 0.648 | T | -62.8 | -14.6 | NA | NA | NA | |||||||||||||
| 7li5 | 1 | E9PKB7 | 81.94 | 6e-136 |
X-RAY |
2022-02-02 | PRO | A:27 | A:231 | 94.0 | 0.648 | T | -60.5 | -22.7 | 94.0 | 0.648 | 0.0 |
HOH |
9.342 |
O |
O |
||
| PRO | B:27 | B:231 | 110.0 | 0.759 | T | -59.1 | -27.1 | NA | NA | NA | |||||||||||||
AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-q15561-f1 | 1 | Q15561 | 100.0 | 0.0 | PRO | A:239 | A:239 | 100.0 | 0.69 | T | -48.5 | -32.9 | |