Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr12 | 3147203 | . | C | A | CCDS31729.1:NM_003213.3:c.967Ccc>Acc_NP_003204.2:p.323P>T | Homo sapiens TEA domain transcription factor 4 (TEAD4), transcript variant 1, mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 6ge3 | 1 | Q15561 | 100.0 | 3e-166 |
X-RAY |
2018-09-19 | PRO | A:108 | A:323 | 86.0 | 0.593 | S | -74.2 | -16.1 | 86.0 | 0.593 | 0.0 |
HOH |
2.646 |
O |
O |
||
| 6gec | 1 | Q15561 | 100.0 | 3e-166 |
X-RAY |
2018-09-19 | PRO | A:108 | A:323 | 96.0 | 0.662 | S | -72.0 | -12.7 | 96.0 | 0.662 | 0.0 |
HOH |
2.633 |
O |
O |
||
| 6ge5 | 1 | Q15561 | 99.54 | 1e-165 |
X-RAY |
2018-09-19 | PRO | A:108 | A:323 | 91.0 | 0.628 | S | -72.0 | -18.1 | 91.0 | 0.628 | 0.0 |
HOH |
2.683 |
O |
O |
||
| 6geg | 1 | Q15561 | 99.54 | 1e-165 |
X-RAY |
2018-09-19 | PRO | A:108 | A:323 | 91.0 | 0.628 | S | -69.6 | -12.4 | 91.0 | 0.628 | 0.0 |
HOH |
3.170 |
O |
O |
||
| 6gek | 1 | Q15561 | 99.54 | 1e-165 |
X-RAY |
2018-09-19 | PRO | A:108 | A:323 | 83.0 | 0.572 | S | -67.8 | -21.3 | 83.0 | 0.572 | 0.0 |
HOH |
3.310 |
N |
O |
||
| PRO | C:108 | B:323 | 85.0 | 0.586 | S | -71.3 | -12.2 | NA | NA | NA | |||||||||||||
| 6hik | 1 | Q15561 | 99.54 | 2e-165 |
X-RAY |
2019-04-03 | PRO | A:108 | A:323 | 94.0 | 0.648 | S | -72.8 | -16.6 | 94.0 | 0.648 | 0.0 |
HOH |
3.396 |
N |
O |
||
| 6ge4 | 1 | Q15561 | 99.54 | 2e-165 |
X-RAY |
2018-09-19 | PRO | A:108 | A:323 | 80.0 | 0.552 | S | -67.3 | -21.2 | 80.0 | 0.552 | 0.0 |
HOH |
3.477 |
CD |
O |
||
| 6gee | 1 | Q15561 | 99.54 | 2e-165 |
X-RAY |
2018-09-19 | PRO | A:108 | A:323 | 96.0 | 0.662 | S | -71.7 | -17.5 | 96.0 | 0.662 | 0.0 |
HOH |
2.600 |
O |
O |
||
| 5oaq | 1 | Q15561 | 100.0 | 5e-165 |
X-RAY |
2017-10-11 | PRO | A:109 | A:323 | 87.0 | 0.6 | S | -74.8 | -14.2 | 87.0 | 0.6 | 0.0 |
HOH |
3.481 |
CD |
O |
||
| 6q2x | 1 | Q15561 | 100.0 | 5e-165 |
X-RAY |
2019-07-03 | PRO | A:109 | A:323 | 85.0 | 0.586 | S | -71.4 | -15.5 | 85.0 | 0.586 | 0.0 |
HOH |
3.424 |
CD |
O |
||
| 6q36 | 1 | Q15561 | 100.0 | 5e-165 |
X-RAY |
2019-07-03 | PRO | A:109 | A:323 | 86.0 | 0.593 | S | -76.0 | -21.5 | 86.0 | 0.593 | 0.0 |
HOH |
3.256 |
CG |
O |
||
| PRO | B:109 | B:323 | 83.0 | 0.572 | S | -72.0 | -14.3 | 83.0 | 0.572 | 0.0 |
HOH |
3.340 |
CG |
O |
|||||||||
| 6ge6 | 1 | Q15561 | 99.09 | 1e-164 |
X-RAY |
2018-09-19 | PRO | A:108 | A:323 | 92.0 | 0.634 | S | -69.1 | -16.8 | 92.0 | 0.634 | 0.0 |
HOH |
3.594 |
N |
O |
||
| 6gei | 1 | Q15561 | 99.09 | 1e-164 |
X-RAY |
2018-09-19 | PRO | A:108 | A:323 | 96.0 | 0.662 | S | -69.8 | -16.8 | 96.0 | 0.662 | 0.0 |
HOH |
3.254 |
N |
O |
||
| 6sen | 1 | Q15561 | 99.54 | 5e-164 |
X-RAY |
2019-11-20 | PRO | A:109 | A:323 | 89.0 | 0.614 | S | -70.5 | -15.4 | 89.0 | 0.614 | 0.0 |
HOH |
2.588 |
O |
O |
||
| PRO | B:109 | B:323 | 74.0 | 0.51 | S | -73.6 | -19.3 | NA | NA | NA | |||||||||||||
| 6seo | 1 | Q15561 | 99.54 | 5e-164 |
X-RAY |
2019-11-20 | PRO | A:109 | A:323 | 95.0 | 0.655 | S | -79.9 | -15.0 | 95.0 | 0.655 | 0.0 |
HOH |
8.333 |
C |
O |
||
| 4ln0 | 1 | Q62296 | 96.35 | 3e-161 |
X-RAY |
2014-02-26 | PRO | A:111 | A:316 | 69.0 | 0.476 | S | -76.6 | -32.1 | 69.0 | 0.476 | 0.0 | ||||||
| PRO | B:111 | B:316 | 73.0 | 0.503 | S | -76.3 | -32.7 | 73.0 | 0.503 | 0.0 | |||||||||||||
| 6l9f | 1 | Q62296 | 96.35 | 3e-161 |
X-RAY |
2019-12-11 | PRO | A:111 | A:316 | 86.0 | 0.593 | S | -85.1 | -9.1 | 86.0 | 0.593 | 0.0 |
HOH |
3.774 |
N |
O |
||
| PRO | C:111 | B:316 | 72.0 | 0.497 | S | -75.5 | -11.0 | NA | NA | NA | |||||||||||||
| 6sba | 1 | Q62296 | 96.35 | 9e-161 |
X-RAY |
2020-09-30 | PRO | A:110 | A:316 | 97.0 | 0.669 | S | -76.7 | -12.6 | 97.0 | 0.669 | 0.0 |
HOH |
2.741 |
O |
O |
||
| 3jua | 1 | Q62296 | 96.33 | 2e-160 |
X-RAY |
2010-02-23 | PRO | A:109 | A:316 | 85.0 | 0.586 | S | -75.2 | -20.8 | 85.0 | 0.586 | 0.0 |
HOH |
7.716 |
C |
O |
||
| PRO | C:109 | C:316 | 90.0 | 0.621 | S | -64.8 | -13.0 | NA | NA | NA | |||||||||||||
| PRO | E:109 | E:316 | 80.0 | 0.552 | S | -76.0 | -19.7 | NA | NA | NA | |||||||||||||
| PRO | G:109 | G:316 | 75.0 | 0.517 | S | -85.4 | -12.1 | NA | NA | NA | |||||||||||||
| 5xjd | 1 | Q62296 | 96.33 | 2e-160 |
X-RAY |
2018-01-24 | PRO | A:109 | A:316 | 48.0 | 0.331 | S | -74.6 | -10.6 | 48.0 | 0.331 | 0.0 |
HOH |
2.619 |
O |
O |
||
| PRO | B:109 | B:316 | 64.0 | 0.441 | S | -75.1 | -6.7 | 64.0 | 0.441 | 0.0 |
HOH |
5.480 |
O |
O |
|||||||||
| 5gn0 | 1 | Q62296 | 96.33 | 4e-160 |
X-RAY |
2017-05-31 | PRO | A:114 | A:316 | 63.0 | 0.434 | S | -70.6 | -34.8 | 63.0 | 0.434 | 0.0 | ||||||
| PRO | B:114 | B:316 | 59.0 | 0.407 | S | -68.1 | -36.7 | NA | NA | NA | |||||||||||||
| PRO | C:114 | C:316 | 60.0 | 0.414 | S | -65.5 | -30.1 | NA | NA | NA | |||||||||||||
| PRO | D:114 | D:316 | 83.0 | 0.572 | S | -72.1 | -40.4 | NA | NA | NA | |||||||||||||
| 5z2q | 3 | Q62296 | 96.31 | 1e-159 |
X-RAY |
2018-01-31 | PRO | C:116 | A:316 | 91.0 | 0.628 | S | -72.6 | -26.3 | NA | NA | NA | ||||||
| 5z2q | 4 | Q62296 | 96.31 | 2e-159 |
X-RAY |
2018-01-31 | PRO | D:118 | B:316 | 81.0 | 0.559 | S | -73.3 | -25.3 | 81.0 | 0.559 | 0.0 | ||||||
| 7cmm | 1 | P28347 | 81.45 | 8e-139 |
X-RAY |
2021-02-03 | SER | A:119 | A:315 | 73.0 | 0.635 | S | -68.5 | -42.1 | 73.0 | 0.635 | 0.0 | ||||||
| SER | B:119 | B:315 | 87.0 | 0.757 | S | -86.5 | -35.9 | NA | NA | NA | |||||||||||||
| SER | C:119 | C:315 | 66.0 | 0.574 | S | -68.9 | -44.1 | NA | NA | NA | |||||||||||||
| SER | D:119 | D:315 | 79.0 | 0.687 | S | -85.1 | -34.3 | NA | NA | NA | |||||||||||||
| 4re1 | 1 | P28347 | 81.28 | 2e-137 |
X-RAY |
2014-11-19 | SER | A:109 | A:300 | 93.0 | 0.809 | S | -86.7 | -14.7 | 93.0 | 0.809 | 0.0 |
HOH |
8.579 |
N |
O |
||
| SER | B:109 | B:300 | 88.0 | 0.765 | S | -86.3 | -6.2 | NA | NA | NA | |||||||||||||
| 6hil | 1 | P28347 | 81.65 | 4e-137 |
X-RAY |
2019-04-03 | SER | A:108 | A:300 | 51.0 | 0.443 | S | -89.4 | -14.2 | 51.0 | 0.443 | 0.0 |
HOH |
9.061 |
C |
O |
||
| SER | C:108 | D:300 | 51.0 | 0.443 | S | -87.7 | -8.2 | NA | NA | NA | |||||||||||||
| SER | E:108 | B:300 | 80.0 | 0.696 | S | -99.1 | -2.7 | NA | NA | NA | |||||||||||||
| SER | G:108 | C:300 | 57.0 | 0.496 | S | -74.0 | -13.2 | NA | NA | NA | |||||||||||||
| 3kys | 1 | P28347 | 81.65 | 4e-137 |
X-RAY |
2010-02-23 | SER | A:108 | A:300 | 65.0 | 0.565 | S | -89.9 | -4.5 | 65.0 | 0.565 | 0.0 | ||||||
| SER | C:108 | C:300 | 87.0 | 0.757 | S | -43.2 | -39.1 | NA | NA | NA | |||||||||||||
| 6im5 | 1 | P28347 | 81.36 | 2e-136 |
X-RAY |
2019-02-06 | SER | A:122 | A:315 | 101.0 | 0.878 | S | -75.3 | -15.1 | 101.0 | 0.878 | 0.0 |
HOH |
2.529 |
O |
O |
||
| SER | B:122 | B:315 | 82.0 | 0.713 | S | -84.8 | -17.1 | NA | NA | NA | |||||||||||||
| 7li5 | 1 | E9PKB7 | 81.94 | 6e-136 |
X-RAY |
2022-02-02 | SER | A:111 | A:315 | 103.0 | 0.896 | S | -84.3 | -13.9 | 103.0 | 0.896 | 0.0 |
HOH |
2.817 |
N |
O |
||
| SER | B:111 | B:315 | 91.0 | 0.791 | S | -88.5 | -14.8 | NA | NA | NA | |||||||||||||
AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-q15561-f1 | 1 | Q15561 | 100.0 | 0.0 | PRO | A:323 | A:323 | 82.0 | 0.566 | S | -75.2 | -18.6 | |