Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr12 | 6128467 | . | C | A | CCDS8539.1:NM_000552.3:c.4117Gac>Tac_NP_000543.2:p.1373D>Y | Homo sapiens von Willebrand factor (VWF), mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
5bv8 | 1 | P04275 | 99.11 | 3e-149 |
X-RAY |
2015-12-23 | ASP | A:148 | A:1373 | 80.0 | 0.533 | -99.6 | 7.9 | 80.0 | 0.533 | 0.0 |
HOH |
2.636 |
OD1 |
O |
|||
7f49 | 1 | P04275 | 99.05 | 2e-140 |
X-RAY |
2021-07-07 | ASP | A:115 | A:610 | 99.0 | 0.66 | -102.9 | 2.7 | 99.0 | 0.66 | 0.0 |
A2M HOH |
8.152 2.698 |
N OD2 |
C2 O |
|||
1uex | 3 | P04275 | 99.52 | 3e-140 |
X-RAY |
2003-09-30 | ASP | C:114 | C:610 | 88.0 | 0.587 | -89.0 | 4.0 | 88.0 | 0.587 | 0.0 |
HOH |
3.706 |
CG |
O |
|||
3hxo | 1 | P04275 | 99.52 | 3e-140 |
X-RAY |
2009-11-17 | ASP | A:114 | A:610 | 68.0 | 0.453 | -89.6 | -5.9 | 68.0 | 0.453 | 0.0 |
HOH |
2.986 |
O |
O |
|||
3hxq | 1 | P04275 | 99.52 | 3e-140 |
X-RAY |
2009-11-17 | ASP | A:114 | A:610 | 61.0 | 0.407 | S | -66.9 | -32.6 | 61.0 | 0.407 | 0.0 |
HOH |
9.437 |
N |
O |
||
7eow | 1 | P04275 | 100.0 | 7e-140 |
X-RAY |
2021-07-07 | ASP | A:137 | A:137 | 86.0 | 0.573 | S | -67.6 | -33.3 | 86.0 | 0.573 | 0.0 |
HOH |
2.470 |
OD2 |
O |
||
1auq | 1 | P04275 | 99.52 | 1e-139 |
X-RAY |
1998-10-14 | ASP | A:113 | A:610 | 78.0 | 0.52 | S | -83.5 | -8.9 | 78.0 | 0.52 | 0.0 |
HOH |
4.901 |
OD2 |
O |
||
1u0n | 1 | P04275 | 99.52 | 1e-139 |
X-RAY |
2005-04-19 | ASP | A:113 | A:610 | 84.0 | 0.56 | -90.2 | -10.0 | 66.0 | 0.44 | 0.12 |
D:P07359:0.12 |
||||||
1m10 | 1 | P04275 | 99.04 | 7e-139 |
X-RAY |
2002-08-28 | ASP | A:113 | A:610 | 83.0 | 0.553 | S | -69.6 | -66.2 | 46.0 | 0.307 | 0.246 |
B:P07359:0.247 |
|||||
7a6o | 1 | L8E853 | 99.51 | 5e-137 |
X-RAY |
2021-03-03 | ASP | A:112 | AAA:1373 | 84.0 | 0.56 | S | -59.4 | -37.1 | 84.0 | 0.56 | 0.0 |
HOH |
2.580 |
H |
O |
||
1ijb | 1 | P04275 | 99.01 | 4e-134 |
X-RAY |
2002-07-10 | ASP | A:111 | A:610 | 81.0 | 0.54 | S | -85.5 | -9.6 | 81.0 | 0.54 | 0.0 |
HOH |
2.972 |
OD1 |
O |
||
1ijk | 1 | P04275 | 99.01 | 4e-134 |
X-RAY |
2002-07-10 | ASP | A:111 | A:610 | 93.0 | 0.62 | -93.8 | 13.4 | 93.0 | 0.62 | 0.0 |
HOH |
2.899 |
OD1 |
O |
|||
1sq0 | 1 | P04275 | 99.01 | 5e-134 |
X-RAY |
2004-04-13 | ASP | A:115 | A:610 | 90.0 | 0.6 | S | -74.3 | 14.5 | 50.0 | 0.333 | 0.267 |
B:P07359:0.267 |
HOH |
2.737 |
OD2 |
O |
|
4c2a | 1 | P04275 | 98.48 | 3e-130 |
X-RAY |
2014-01-08 | ASP | A:111 | A:1373 | 77.0 | 0.513 | S | -69.0 | -29.3 | 33.0 | 0.22 | 0.293 |
B:P07359:0.293 |
HOH |
3.177 |
O |
O |
|
1oak | 3 | P04275 | 99.49 | 1e-128 |
X-RAY |
1998-10-21 | ASP | C:104 | A:610 | 77.0 | 0.513 | S | -71.5 | -17.9 | 77.0 | 0.513 | 0.0 |
HOH |
3.050 |
OD1 |
O |
||
1fns | 3 | P04275 | 98.97 | 2e-128 |
X-RAY |
2000-10-18 | ASP | C:104 | A:610 | 101.0 | 0.673 | S | -69.6 | -33.5 | 101.0 | 0.673 | 0.0 |
HOH |
2.544 |
OD2 |
O |
||
4c29 | 1 | P04275 | 98.48 | 4e-128 |
X-RAY |
2014-01-08 | ASP | A:111 | A:1373 | 67.0 | 0.447 | S | -89.6 | -8.5 | 67.0 | 0.447 | 0.0 |
HOH |
2.301 |
O |
O |
||
ASP | B:111 | B:1373 | 68.0 | 0.453 | S | -89.0 | -7.1 | NA | NA | NA | |||||||||||||
4c2b | 1 | P04275 | 98.48 | 4e-128 |
X-RAY |
2014-01-08 | ASP | A:111 | A:1373 | 76.0 | 0.507 | S | -82.9 | -31.8 | 60.0 | 0.4 | 0.107 |
B:P07359:0.107 |
HOH |
3.715 |
O |
O |
|
ASP | C:111 | C:1373 | 59.0 | 0.393 | S | -86.2 | -27.2 | NA | NA | NA | |||||||||||||
ASP | E:111 | E:1373 | 77.0 | 0.513 | S | -75.0 | -24.2 | NA | NA | NA | |||||||||||||
ASP | G:111 | G:1373 | 72.0 | 0.48 | S | -90.2 | -26.3 | NA | NA | NA | |||||||||||||
1u0o | 3 | Q8CIZ8 | 87.02 | 2e-119 |
X-RAY |
2005-04-19 | ASP | C:113 | C:610 | 88.0 | 0.587 | S | -74.1 | -9.6 | 88.0 | 0.587 | 0.0 |
HOH |
3.002 |
CB |
O |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p04275-f1 | 1 | P04275 | 99.93 | 0.0 | ASP | A:1373 | A:1373 | 127.0 | 0.847 | -84.9 | 142.0 | ||
af-p04275-f2 | 1 | P04275 | 99.93 | 0.0 | ASP | A:1173 | A:1173 | 66.0 | 0.44 | S | -95.5 | -16.4 | |
af-p04275-f3 | 1 | P04275 | 99.93 | 0.0 | ASP | A:973 | A:973 | 78.0 | 0.52 | S | -93.7 | -12.5 | |
af-p04275-f6 | 1 | P04275 | 100.0 | 0.0 | ASP | A:373 | A:373 | 74.0 | 0.493 | S | -114.7 | -3.2 | |
af-p04275-f5 | 1 | P04275 | 99.93 | 0.0 | ASP | A:573 | A:573 | 78.0 | 0.52 | S | -88.4 | -20.7 | |
af-p04275-f7 | 1 | P04275 | 100.0 | 0.0 | ASP | A:173 | A:173 | 71.0 | 0.473 | S | -108.4 | -29.2 | |
af-p04275-f4 | 1 | P04275 | 99.93 | 0.0 | ASP | A:773 | A:773 | 70.0 | 0.467 | S | -78.8 | -20.7 |