Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr12 | 6128469 | . | A | C | CCDS8539.1:NM_000552.3:c.4115aTc>aGc_NP_000543.2:p.1372I>S | Homo sapiens von Willebrand factor (VWF), mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
5bv8 | 1 | P04275 | 99.11 | 3e-149 |
X-RAY |
2015-12-23 | ILE | A:147 | A:1372 | 59.0 | 0.337 | -86.3 | 83.2 | 59.0 | 0.337 | 0.0 |
HOH |
2.857 |
N |
O |
|||
7f49 | 1 | P04275 | 99.05 | 2e-140 |
X-RAY |
2021-07-07 | ILE | A:114 | A:609 | 64.0 | 0.366 | -91.9 | 78.1 | 64.0 | 0.366 | 0.0 |
A2M OMG HOH |
4.184 7.512 2.740 |
CG1 CG1 O |
C2 N7 O |
|||
1uex | 3 | P04275 | 99.52 | 3e-140 |
X-RAY |
2003-09-30 | ILE | C:113 | C:609 | 67.0 | 0.383 | -74.4 | 80.4 | 67.0 | 0.383 | 0.0 |
HOH |
5.227 |
N |
O |
|||
3hxo | 1 | P04275 | 99.52 | 3e-140 |
X-RAY |
2009-11-17 | ILE | A:113 | A:609 | 47.0 | 0.269 | -80.2 | 89.4 | 47.0 | 0.269 | 0.0 |
DT HOH |
9.992 2.902 |
N O |
O4 O |
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3hxq | 1 | P04275 | 99.52 | 3e-140 |
X-RAY |
2009-11-17 | ILE | A:113 | A:609 | 70.0 | 0.4 | -93.2 | 97.5 | 70.0 | 0.4 | 0.0 |
HOH |
6.855 |
N |
O |
|||
7eow | 1 | P04275 | 100.0 | 7e-140 |
X-RAY |
2021-07-07 | ILE | A:136 | A:136 | 53.0 | 0.303 | -83.1 | 96.7 | 53.0 | 0.303 | 0.0 |
HOH |
3.675 |
CA |
O |
|||
1auq | 1 | P04275 | 99.52 | 1e-139 |
X-RAY |
1998-10-14 | ILE | A:112 | A:609 | 33.0 | 0.189 | -58.5 | 96.3 | 33.0 | 0.189 | 0.0 |
HOH |
2.979 |
O |
O |
|||
1u0n | 1 | P04275 | 99.52 | 1e-139 |
X-RAY |
2005-04-19 | ILE | A:112 | A:609 | 49.0 | 0.28 | -93.4 | 82.0 | 49.0 | 0.28 | 0.0 | |||||||
1m10 | 1 | P04275 | 99.04 | 7e-139 |
X-RAY |
2002-08-28 | ILE | A:112 | A:609 | 58.0 | 0.331 | -117.6 | 92.7 | 58.0 | 0.331 | 0.0 | |||||||
7a6o | 1 | L8E853 | 99.51 | 5e-137 |
X-RAY |
2021-03-03 | ILE | A:111 | AAA:1372 | 37.0 | 0.211 | -98.0 | 89.3 | 37.0 | 0.211 | 0.0 |
HOH |
2.838 |
HA |
O |
|||
1ijb | 1 | P04275 | 99.01 | 4e-134 |
X-RAY |
2002-07-10 | ILE | A:110 | A:609 | 60.0 | 0.343 | -78.7 | 92.1 | 60.0 | 0.343 | 0.0 |
HOH |
2.921 |
N |
O |
|||
1ijk | 1 | P04275 | 99.01 | 4e-134 |
X-RAY |
2002-07-10 | ILE | A:110 | A:609 | 56.0 | 0.32 | -100.5 | 90.9 | 56.0 | 0.32 | 0.0 |
HOH |
4.479 |
CA |
O |
|||
1sq0 | 1 | P04275 | 99.01 | 5e-134 |
X-RAY |
2004-04-13 | ILE | A:114 | A:609 | 86.0 | 0.491 | -147.4 | 67.2 | 86.0 | 0.491 | 0.0 |
HOH |
5.112 |
CA |
O |
|||
4c2a | 1 | P04275 | 98.48 | 3e-130 |
X-RAY |
2014-01-08 | ILE | A:110 | A:1372 | 67.0 | 0.383 | -87.7 | 80.3 | 67.0 | 0.383 | 0.0 |
HOH |
4.394 |
CG2 |
O |
|||
1oak | 3 | P04275 | 99.49 | 1e-128 |
X-RAY |
1998-10-21 | ILE | C:103 | A:609 | 54.0 | 0.309 | -102.6 | 86.0 | 54.0 | 0.309 | 0.0 |
HOH |
3.558 |
CG1 |
O |
|||
1fns | 3 | P04275 | 98.97 | 2e-128 |
X-RAY |
2000-10-18 | ILE | C:103 | A:609 | 57.0 | 0.326 | -104.2 | 95.2 | 57.0 | 0.326 | 0.0 |
HOH |
2.719 |
N |
O |
|||
4c29 | 1 | P04275 | 98.48 | 4e-128 |
X-RAY |
2014-01-08 | ILE | A:110 | A:1372 | 55.0 | 0.314 | -92.6 | 91.9 | 55.0 | 0.314 | 0.0 |
HOH |
4.369 |
CG2 |
O |
|||
ILE | B:110 | B:1372 | 51.0 | 0.291 | -94.6 | 94.3 | NA | NA | NA | ||||||||||||||
4c2b | 1 | P04275 | 98.48 | 4e-128 |
X-RAY |
2014-01-08 | ILE | A:110 | A:1372 | 99.0 | 0.566 | -95.6 | 90.9 | 99.0 | 0.566 | 0.0 |
HOH |
7.536 |
O |
O |
|||
ILE | C:110 | C:1372 | 78.0 | 0.446 | -83.1 | 99.6 | NA | NA | NA | ||||||||||||||
ILE | E:110 | E:1372 | 88.0 | 0.503 | -103.4 | 86.6 | NA | NA | NA | ||||||||||||||
ILE | G:110 | G:1372 | 71.0 | 0.406 | -82.6 | 106.3 | NA | NA | NA | ||||||||||||||
1u0o | 3 | Q8CIZ8 | 87.02 | 2e-119 |
X-RAY |
2005-04-19 | ILE | C:112 | C:609 | 64.0 | 0.366 | -112.0 | 83.1 | 64.0 | 0.366 | 0.0 |
HOH |
4.798 |
C |
O |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p04275-f1 | 1 | P04275 | 99.93 | 0.0 | ILE | A:1372 | A:1372 | 10.0 | 0.057 | -146.7 | 108.9 | ||
af-p04275-f2 | 1 | P04275 | 99.93 | 0.0 | ILE | A:1172 | A:1172 | 67.0 | 0.383 | -85.4 | 103.1 | ||
af-p04275-f3 | 1 | P04275 | 99.93 | 0.0 | ILE | A:972 | A:972 | 74.0 | 0.423 | -88.5 | 104.8 | ||
af-p04275-f6 | 1 | P04275 | 100.0 | 0.0 | ILE | A:372 | A:372 | 86.0 | 0.491 | -69.5 | 115.2 | ||
af-p04275-f5 | 1 | P04275 | 99.93 | 0.0 | ILE | A:572 | A:572 | 70.0 | 0.4 | -90.7 | 100.7 | ||
af-p04275-f7 | 1 | P04275 | 100.0 | 0.0 | ILE | A:172 | A:172 | 74.0 | 0.423 | -86.3 | 120.3 | ||
af-p04275-f4 | 1 | P04275 | 99.93 | 0.0 | ILE | A:772 | A:772 | 67.0 | 0.383 | -92.8 | 90.5 |