Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr12 | 6128493 | . | G | A | CCDS8539.1:NM_000552.3:c.4091aCa>aTa_NP_000543.2:p.1364T>I | Homo sapiens von Willebrand factor (VWF), mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
5bv8 | 1 | P04275 | 99.11 | 3e-149 |
X-RAY |
2015-12-23 | THR | A:139 | A:1364 | 0.0 | 0.0 | I | -63.9 | -42.6 | 0.0 | 0.0 | 0.0 |
HOH |
6.140 |
O |
O |
||
7f49 | 1 | P04275 | 99.05 | 2e-140 |
X-RAY |
2021-07-07 | THR | A:106 | A:601 | 0.0 | 0.0 | I | -64.3 | -44.7 | 0.0 | 0.0 | 0.0 |
A2M OMG A2M HOH |
9.906 8.002 7.830 5.811 |
C O N N |
C2 N7 N6 O |
||
1uex | 3 | P04275 | 99.52 | 3e-140 |
X-RAY |
2003-09-30 | THR | C:105 | C:601 | 0.0 | 0.0 | I | -59.2 | -40.6 | 0.0 | 0.0 | 0.0 |
HOH |
7.555 |
O |
O |
||
3hxo | 1 | P04275 | 99.52 | 3e-140 |
X-RAY |
2009-11-17 | THR | A:105 | A:601 | 0.0 | 0.0 | I | -51.6 | -47.7 | 0.0 | 0.0 | 0.0 |
DT HOH |
9.011 5.843 |
O N |
O4 O |
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3hxq | 1 | P04275 | 99.52 | 3e-140 |
X-RAY |
2009-11-17 | THR | A:105 | A:601 | 0.0 | 0.0 | I | -54.3 | -44.2 | 0.0 | 0.0 | 0.0 |
DT HOH |
9.399 6.417 |
O N |
N3 O |
||
7eow | 1 | P04275 | 100.0 | 7e-140 |
X-RAY |
2021-07-07 | THR | A:128 | A:128 | 0.0 | 0.0 | I | -61.2 | -41.9 | 0.0 | 0.0 | 0.0 |
HOH |
5.945 |
N |
O |
||
1auq | 1 | P04275 | 99.52 | 1e-139 |
X-RAY |
1998-10-14 | THR | A:104 | A:601 | 0.0 | 0.0 | I | -71.7 | -38.4 | 0.0 | 0.0 | 0.0 |
HOH |
7.478 |
O |
O |
||
1u0n | 1 | P04275 | 99.52 | 1e-139 |
X-RAY |
2005-04-19 | THR | A:104 | A:601 | 0.0 | 0.0 | I | -68.4 | -36.2 | 0.0 | 0.0 | 0.0 | ||||||
1m10 | 1 | P04275 | 99.04 | 7e-139 |
X-RAY |
2002-08-28 | THR | A:104 | A:601 | 0.0 | 0.0 | I | -61.4 | -42.3 | 0.0 | 0.0 | 0.0 | ||||||
7a6o | 1 | L8E853 | 99.51 | 5e-137 |
X-RAY |
2021-03-03 | THR | A:103 | AAA:1364 | 0.0 | 0.0 | I | -69.3 | -43.0 | 0.0 | 0.0 | 0.0 |
HOH |
8.072 |
O |
O |
||
1ijb | 1 | P04275 | 99.01 | 4e-134 |
X-RAY |
2002-07-10 | THR | A:102 | A:601 | 0.0 | 0.0 | I | -62.4 | -45.3 | 0.0 | 0.0 | 0.0 |
HOH |
5.933 |
N |
O |
||
1ijk | 1 | P04275 | 99.01 | 4e-134 |
X-RAY |
2002-07-10 | THR | A:102 | A:601 | 0.0 | 0.0 | I | -62.7 | -45.6 | 0.0 | 0.0 | 0.0 |
HOH |
6.561 |
O |
O |
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1sq0 | 1 | P04275 | 99.01 | 5e-134 |
X-RAY |
2004-04-13 | THR | A:106 | A:601 | 0.0 | 0.0 | I | -59.2 | -46.4 | 0.0 | 0.0 | 0.0 |
HOH |
7.001 |
N |
O |
||
4c2a | 1 | P04275 | 98.48 | 3e-130 |
X-RAY |
2014-01-08 | THR | A:102 | A:1364 | 0.0 | 0.0 | I | -61.7 | -43.7 | 0.0 | 0.0 | 0.0 |
HOH |
6.266 |
N |
O |
||
1oak | 3 | P04275 | 99.49 | 1e-128 |
X-RAY |
1998-10-21 | THR | C:95 | A:601 | 0.0 | 0.0 | I | -65.6 | -42.7 | 0.0 | 0.0 | 0.0 |
HOH |
6.070 |
N |
O |
||
1fns | 3 | P04275 | 98.97 | 2e-128 |
X-RAY |
2000-10-18 | THR | C:95 | A:601 | 0.0 | 0.0 | I | -63.6 | -44.1 | 0.0 | 0.0 | 0.0 |
HOH |
6.318 |
O |
O |
||
4c29 | 1 | P04275 | 98.48 | 4e-128 |
X-RAY |
2014-01-08 | THR | A:102 | A:1364 | 0.0 | 0.0 | I | -64.0 | -39.0 | 0.0 | 0.0 | 0.0 |
HOH |
7.690 |
O |
O |
||
THR | B:102 | B:1364 | 0.0 | 0.0 | I | -64.0 | -39.0 | NA | NA | NA | |||||||||||||
4c2b | 1 | P04275 | 98.48 | 4e-128 |
X-RAY |
2014-01-08 | THR | A:102 | A:1364 | 0.0 | 0.0 | I | -74.9 | -34.4 | 0.0 | 0.0 | 0.0 | ||||||
THR | C:102 | C:1364 | 0.0 | 0.0 | I | -65.3 | -39.9 | NA | NA | NA | |||||||||||||
THR | E:102 | E:1364 | 0.0 | 0.0 | I | -75.7 | -18.0 | NA | NA | NA | |||||||||||||
THR | G:102 | G:1364 | 0.0 | 0.0 | I | -62.9 | -38.5 | NA | NA | NA | |||||||||||||
1u0o | 3 | Q8CIZ8 | 87.02 | 2e-119 |
X-RAY |
2005-04-19 | THR | C:104 | C:601 | 0.0 | 0.0 | H | -52.1 | -50.0 | 0.0 | 0.0 | 0.0 |
HOH |
7.839 |
O |
O |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p04275-f1 | 1 | P04275 | 99.93 | 0.0 | THR | A:1364 | A:1364 | 2.0 | 0.014 | I | -64.0 | -42.6 | |
af-p04275-f2 | 1 | P04275 | 99.93 | 0.0 | THR | A:1164 | A:1164 | 0.0 | 0.0 | I | -61.0 | -41.4 | |
af-p04275-f3 | 1 | P04275 | 99.93 | 0.0 | THR | A:964 | A:964 | 0.0 | 0.0 | I | -61.7 | -41.9 | |
af-p04275-f6 | 1 | P04275 | 100.0 | 0.0 | THR | A:364 | A:364 | 0.0 | 0.0 | I | -59.2 | -40.8 | |
af-p04275-f5 | 1 | P04275 | 99.93 | 0.0 | THR | A:564 | A:564 | 0.0 | 0.0 | I | -58.5 | -40.1 | |
af-p04275-f7 | 1 | P04275 | 100.0 | 0.0 | THR | A:164 | A:164 | 0.0 | 0.0 | I | -57.9 | -39.0 | |
af-p04275-f4 | 1 | P04275 | 99.93 | 0.0 | THR | A:764 | A:764 | 0.0 | 0.0 | I | -60.5 | -41.3 |