Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr12 | 6128562 | . | C | A | CCDS8539.1:NM_000552.3:c.4022cGg>cTg_NP_000543.2:p.1341R>L | Homo sapiens von Willebrand factor (VWF), mRNA. |
---|---|---|---|---|---|---|---|
|
|
|
|
PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
5bv8 | 1 | P04275 | 99.11 | 3e-149 |
X-RAY |
2015-12-23 | ARG | A:116 | A:1341 | 44.0 | 0.196 | H | -66.8 | -37.2 | 44.0 | 0.196 | 0.0 |
HOH |
2.705 |
NH1 |
O |
||
7f49 | 1 | P04275 | 99.05 | 2e-140 |
X-RAY |
2021-07-07 | ARG | A:83 | A:578 | 75.0 | 0.333 | H | -68.3 | -33.0 | 75.0 | 0.333 | 0.0 |
HOH |
5.047 |
NH2 |
O |
||
1uex | 3 | P04275 | 99.52 | 3e-140 |
X-RAY |
2003-09-30 | ARG | C:82 | C:578 | 32.0 | 0.142 | H | -58.4 | -32.0 | 32.0 | 0.142 | 0.0 | ||||||
3hxo | 1 | P04275 | 99.52 | 3e-140 |
X-RAY |
2009-11-17 | ARG | A:82 | A:578 | 72.0 | 0.32 | H | -64.3 | -38.5 | 72.0 | 0.32 | 0.0 |
HOH |
3.009 |
NE |
O |
||
3hxq | 1 | P04275 | 99.52 | 3e-140 |
X-RAY |
2009-11-17 | ARG | A:82 | A:578 | 76.0 | 0.338 | H | -73.4 | -31.6 | 76.0 | 0.338 | 0.0 |
HOH |
3.882 |
CB |
O |
||
7eow | 1 | P04275 | 100.0 | 7e-140 |
X-RAY |
2021-07-07 | ARG | A:105 | A:105 | 45.0 | 0.2 | H | -65.8 | -36.5 | 45.0 | 0.2 | 0.0 |
HOH |
2.860 |
NH1 |
O |
||
1auq | 1 | P04275 | 99.52 | 1e-139 |
X-RAY |
1998-10-14 | ARG | A:81 | A:578 | 44.0 | 0.196 | H | -60.8 | -36.9 | 44.0 | 0.196 | 0.0 |
HOH |
2.750 |
NH1 |
O |
||
1u0n | 1 | P04275 | 99.52 | 1e-139 |
X-RAY |
2005-04-19 | ARG | A:81 | A:578 | 58.0 | 0.258 | H | -70.6 | -21.8 | 58.0 | 0.258 | 0.0 | ||||||
1m10 | 1 | P04275 | 99.04 | 7e-139 |
X-RAY |
2002-08-28 | ARG | A:81 | A:578 | 85.0 | 0.378 | H | -27.1 | -44.0 | 85.0 | 0.378 | 0.0 | ||||||
7a6o | 1 | L8E853 | 99.51 | 5e-137 |
X-RAY |
2021-03-03 | ARG | A:80 | AAA:1341 | 38.0 | 0.169 | H | -65.4 | -41.4 | 38.0 | 0.169 | 0.0 |
HOH |
2.098 |
HH11 |
O |
||
1ijb | 1 | P04275 | 99.01 | 4e-134 |
X-RAY |
2002-07-10 | ARG | A:79 | A:578 | 41.0 | 0.182 | H | -65.1 | -37.9 | 41.0 | 0.182 | 0.0 |
HOH |
2.581 |
NH2 |
O |
||
1ijk | 1 | P04275 | 99.01 | 4e-134 |
X-RAY |
2002-07-10 | ARG | A:79 | A:578 | 48.0 | 0.213 | H | -66.8 | -34.2 | 48.0 | 0.213 | 0.0 |
HOH |
2.642 |
NH2 |
O |
||
1sq0 | 1 | P04275 | 99.01 | 5e-134 |
X-RAY |
2004-04-13 | ARG | A:83 | A:578 | 76.0 | 0.338 | H | -58.6 | -36.4 | 76.0 | 0.338 | 0.0 |
HOH |
3.020 |
NH2 |
O |
||
4c2a | 1 | P04275 | 98.48 | 3e-130 |
X-RAY |
2014-01-08 | ARG | A:79 | A:1341 | 84.0 | 0.373 | H | -65.0 | -41.0 | 84.0 | 0.373 | 0.0 |
CA HOH |
8.873 3.001 |
CD NE |
CA O |
||
1oak | 3 | P04275 | 99.49 | 1e-128 |
X-RAY |
1998-10-21 | ARG | C:72 | A:578 | 64.0 | 0.284 | H | -65.0 | -35.2 | 64.0 | 0.284 | 0.0 |
HOH |
3.113 |
NH1 |
O |
||
1fns | 3 | P04275 | 98.97 | 2e-128 |
X-RAY |
2000-10-18 | ARG | C:72 | A:578 | 79.0 | 0.351 | H | -65.4 | -37.8 | 79.0 | 0.351 | 0.0 |
HOH |
2.902 |
NE |
O |
||
4c29 | 1 | P04275 | 98.48 | 4e-128 |
X-RAY |
2014-01-08 | ARG | A:79 | A:1341 | 77.0 | 0.342 | H | -68.1 | -34.2 | 77.0 | 0.342 | 0.0 |
HOH |
2.589 |
NH1 |
O |
||
ARG | B:79 | B:1341 | 74.0 | 0.329 | H | -68.2 | -33.5 | NA | NA | NA | |||||||||||||
4c2b | 1 | P04275 | 98.48 | 4e-128 |
X-RAY |
2014-01-08 | ARG | A:79 | A:1341 | 61.0 | 0.271 | H | -84.7 | -31.4 | 61.0 | 0.271 | 0.0 |
MES |
3.203 |
NH2 |
O1S |
||
ARG | C:79 | C:1341 | 57.0 | 0.253 | H | -84.2 | -24.6 | NA | NA | NA | |||||||||||||
ARG | E:79 | E:1341 | 60.0 | 0.267 | H | -80.0 | -26.7 | NA | NA | NA | |||||||||||||
ARG | G:79 | G:1341 | 54.0 | 0.24 | H | -80.4 | -17.9 | NA | NA | NA | |||||||||||||
1u0o | 3 | Q8CIZ8 | 87.02 | 2e-119 |
X-RAY |
2005-04-19 | ARG | C:81 | C:578 | 64.0 | 0.284 | H | -68.5 | -25.5 | 64.0 | 0.284 | 0.0 |
HOH |
3.844 |
NH1 |
O |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p04275-f1 | 1 | P04275 | 99.93 | 0.0 | ARG | A:1341 | A:1341 | 28.0 | 0.124 | H | -60.3 | -41.2 | |
af-p04275-f2 | 1 | P04275 | 99.93 | 0.0 | ARG | A:1141 | A:1141 | 51.0 | 0.227 | H | -60.7 | -38.8 | |
af-p04275-f3 | 1 | P04275 | 99.93 | 0.0 | ARG | A:941 | A:941 | 50.0 | 0.222 | H | -60.4 | -41.6 | |
af-p04275-f6 | 1 | P04275 | 100.0 | 0.0 | ARG | A:341 | A:341 | 42.0 | 0.187 | H | -61.7 | -40.6 | |
af-p04275-f5 | 1 | P04275 | 99.93 | 0.0 | ARG | A:541 | A:541 | 49.0 | 0.218 | H | -61.3 | -40.0 | |
af-p04275-f7 | 1 | P04275 | 100.0 | 0.0 | ARG | A:141 | A:141 | 29.0 | 0.129 | H | -61.0 | -41.2 | |
af-p04275-f4 | 1 | P04275 | 99.93 | 0.0 | ARG | A:741 | A:741 | 58.0 | 0.258 | H | -61.1 | -40.2 |