Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr12 | 6128578 | . | G | A | CCDS8539.1:NM_000552.3:c.4006Cga>Tga_NP_000543.2:p.1336R>* | Homo sapiens von Willebrand factor (VWF), mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
5bv8 | 1 | P04275 | 99.11 | 3e-149 |
X-RAY |
2015-12-23 | ARG | A:111 | A:1336 | 127.0 | 0.564 | -54.2 | 141.9 | 127.0 | 0.564 | 0.0 |
HOH |
2.804 |
NE |
O |
|||
7f49 | 1 | P04275 | 99.05 | 2e-140 |
X-RAY |
2021-07-07 | ARG | A:78 | A:573 | 196.0 | 0.871 | -70.0 | 147.4 | 196.0 | 0.871 | 0.0 |
HOH |
3.560 |
CB |
O |
|||
1uex | 3 | P04275 | 99.52 | 3e-140 |
X-RAY |
2003-09-30 | ARG | C:77 | C:573 | 172.0 | 0.764 | -69.3 | 136.0 | 172.0 | 0.764 | 0.0 | |||||||
3hxo | 1 | P04275 | 99.52 | 3e-140 |
X-RAY |
2009-11-17 | ARG | A:77 | A:573 | 194.0 | 0.862 | -61.7 | 136.5 | 194.0 | 0.862 | 0.0 |
HOH |
2.843 |
NH1 |
O |
|||
3hxq | 1 | P04275 | 99.52 | 3e-140 |
X-RAY |
2009-11-17 | ARG | A:77 | A:573 | 145.0 | 0.644 | -105.6 | 134.6 | 145.0 | 0.644 | 0.0 |
HOH |
6.646 |
NH2 |
O |
|||
7eow | 1 | P04275 | 100.0 | 7e-140 |
X-RAY |
2021-07-07 | ARG | A:100 | A:100 | 151.0 | 0.671 | -64.9 | 146.1 | 151.0 | 0.671 | 0.0 |
HOH |
2.937 |
N |
O |
|||
1auq | 1 | P04275 | 99.52 | 1e-139 |
X-RAY |
1998-10-14 | ARG | A:76 | A:573 | 94.0 | 0.418 | -70.6 | 152.1 | 94.0 | 0.418 | 0.0 |
HOH |
3.175 |
N |
O |
|||
1u0n | 1 | P04275 | 99.52 | 1e-139 |
X-RAY |
2005-04-19 | ARG | A:76 | A:573 | 100.0 | 0.444 | -65.9 | 134.4 | 100.0 | 0.444 | 0.0 | |||||||
1m10 | 1 | P04275 | 99.04 | 7e-139 |
X-RAY |
2002-08-28 | ARG | A:76 | A:573 | 167.0 | 0.742 | -56.6 | 145.4 | 167.0 | 0.742 | 0.0 | |||||||
7a6o | 1 | L8E853 | 99.51 | 5e-137 |
X-RAY |
2021-03-03 | ARG | A:75 | AAA:1336 | 169.0 | 0.751 | -65.1 | 126.0 | 169.0 | 0.751 | 0.0 |
HOH |
4.047 |
HH22 |
O |
|||
1ijb | 1 | P04275 | 99.01 | 4e-134 |
X-RAY |
2002-07-10 | ARG | A:74 | A:573 | 127.0 | 0.564 | -58.4 | 143.1 | 127.0 | 0.564 | 0.0 |
HOH |
2.790 |
NH1 |
O |
|||
1ijk | 1 | P04275 | 99.01 | 4e-134 |
X-RAY |
2002-07-10 | ARG | A:74 | A:573 | 192.0 | 0.853 | -61.4 | 145.2 | 192.0 | 0.853 | 0.0 |
HOH |
4.142 |
CD |
O |
|||
1sq0 | 1 | P04275 | 99.01 | 5e-134 |
X-RAY |
2004-04-13 | ARG | A:78 | A:573 | 189.0 | 0.84 | -76.0 | 154.5 | 182.0 | 0.809 | 0.031 |
B:P07359:0.031 |
HOH |
4.131 |
CB |
O |
||
4c2a | 1 | P04275 | 98.48 | 3e-130 |
X-RAY |
2014-01-08 | ARG | A:74 | A:1336 | 161.0 | 0.716 | -68.1 | 144.8 | 161.0 | 0.716 | 0.0 |
HOH |
2.774 |
N |
O |
|||
1oak | 3 | P04275 | 99.49 | 1e-128 |
X-RAY |
1998-10-21 | ARG | C:67 | A:573 | 195.0 | 0.867 | -60.8 | 141.3 | 195.0 | 0.867 | 0.0 |
HOH |
2.866 |
N |
O |
|||
1fns | 3 | P04275 | 98.97 | 2e-128 |
X-RAY |
2000-10-18 | ARG | C:67 | A:573 | 188.0 | 0.836 | -62.8 | 143.5 | 188.0 | 0.836 | 0.0 |
HOH |
2.925 |
N |
O |
|||
4c29 | 1 | P04275 | 98.48 | 4e-128 |
X-RAY |
2014-01-08 | ARG | A:74 | A:1336 | 160.0 | 0.711 | -62.4 | 144.4 | 160.0 | 0.711 | 0.0 |
HOH |
4.925 |
N |
O |
|||
ARG | B:74 | B:1336 | 149.0 | 0.662 | -62.0 | 144.3 | NA | NA | NA | ||||||||||||||
4c2b | 1 | P04275 | 98.48 | 4e-128 |
X-RAY |
2014-01-08 | ARG | A:74 | A:1336 | 171.0 | 0.76 | -65.4 | 148.3 | 171.0 | 0.76 | 0.0 |
MES |
3.002 |
NH1 |
O2S |
|||
ARG | C:74 | C:1336 | 190.0 | 0.844 | -66.9 | 146.7 | NA | NA | NA | ||||||||||||||
ARG | E:74 | E:1336 | 185.0 | 0.822 | -63.7 | 145.2 | NA | NA | NA | ||||||||||||||
ARG | G:74 | G:1336 | 179.0 | 0.796 | -73.3 | 149.8 | NA | NA | NA | ||||||||||||||
1u0o | 3 | Q8CIZ8 | 87.02 | 2e-119 |
X-RAY |
2005-04-19 | ARG | C:76 | C:573 | 167.0 | 0.742 | -68.9 | 146.4 | 167.0 | 0.742 | 0.0 |
HOH |
7.515 |
C |
O |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p04275-f1 | 1 | P04275 | 99.93 | 0.0 | ARG | A:1336 | A:1336 | 147.0 | 0.653 | -62.1 | 144.3 | ||
af-p04275-f2 | 1 | P04275 | 99.93 | 0.0 | ARG | A:1136 | A:1136 | 193.0 | 0.858 | -63.0 | 145.5 | ||
af-p04275-f3 | 1 | P04275 | 99.93 | 0.0 | ARG | A:936 | A:936 | 104.0 | 0.462 | -61.7 | 144.8 | ||
af-p04275-f6 | 1 | P04275 | 100.0 | 0.0 | ARG | A:336 | A:336 | 159.0 | 0.707 | -63.1 | 145.8 | ||
af-p04275-f5 | 1 | P04275 | 99.93 | 0.0 | ARG | A:536 | A:536 | 189.0 | 0.84 | -62.0 | 146.0 | ||
af-p04275-f7 | 1 | P04275 | 100.0 | 0.0 | ARG | A:136 | A:136 | 134.0 | 0.596 | -64.5 | 148.0 | ||
af-p04275-f4 | 1 | P04275 | 99.93 | 0.0 | ARG | A:736 | A:736 | 147.0 | 0.653 | -64.3 | 145.5 |