Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr12 | 6128584 | . | G | A | CCDS8539.1:NM_000552.3:c.4000Cgg>Tgg_NP_000543.2:p.1334R>W | Homo sapiens von Willebrand factor (VWF), mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
5bv8 | 1 | P04275 | 99.11 | 3e-149 |
X-RAY |
2015-12-23 | ARG | A:109 | A:1334 | 87.0 | NA | -90.1 | 81.2 | 87.0 | NA | NA |
HOH |
2.976 |
N |
O |
|||
7f49 | 1 | P04275 | 99.05 | 2e-140 |
X-RAY |
2021-07-07 | ARG | A:76 | A:571 | 208.0 | 0.924 | -83.1 | 72.5 | 208.0 | 0.924 | 0.0 |
HOH |
3.714 |
O |
O |
|||
1uex | 3 | P04275 | 99.52 | 3e-140 |
X-RAY |
2003-09-30 | ARG | C:75 | C:571 | 179.0 | 0.796 | -82.7 | 83.4 | 179.0 | 0.796 | 0.0 |
HOH |
7.632 |
NH2 |
O |
|||
3hxo | 1 | P04275 | 99.52 | 3e-140 |
X-RAY |
2009-11-17 | ARG | A:75 | A:571 | 210.0 | 0.933 | -82.0 | 84.2 | 210.0 | 0.933 | 0.0 |
HOH |
3.471 |
O |
O |
|||
3hxq | 1 | P04275 | 99.52 | 3e-140 |
X-RAY |
2009-11-17 | ARG | A:75 | A:571 | 181.0 | 0.804 | 50.4 | 41.1 | 181.0 | 0.804 | 0.0 |
HOH |
4.262 |
NH1 |
O |
|||
7eow | 1 | P04275 | 100.0 | 7e-140 |
X-RAY |
2021-07-07 | ARG | A:98 | A:98 | 205.0 | 0.911 | -89.2 | 85.0 | 205.0 | 0.911 | 0.0 |
HOH |
2.838 |
NE |
O |
|||
1auq | 1 | P04275 | 99.52 | 1e-139 |
X-RAY |
1998-10-14 | ARG | A:74 | A:571 | 191.0 | 0.849 | -88.7 | 84.0 | 191.0 | 0.849 | 0.0 |
HOH |
3.058 |
NH2 |
O |
|||
1u0n | 1 | P04275 | 99.52 | 1e-139 |
X-RAY |
2005-04-19 | ARG | A:74 | A:571 | 213.0 | 0.947 | -88.0 | 91.6 | 109.0 | 0.484 | 0.463 |
D:P07359:0.462 |
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1m10 | 1 | P04275 | 99.04 | 7e-139 |
X-RAY |
2002-08-28 | ARG | A:74 | A:571 | 203.0 | 0.902 | -94.5 | 105.1 | 114.0 | 0.507 | 0.395 |
B:P07359:0.396 |
||||||
7a6o | 1 | L8E853 | 99.51 | 5e-137 |
X-RAY |
2021-03-03 | ARG | A:73 | AAA:1334 | 211.0 | 0.938 | -81.1 | 84.9 | 211.0 | 0.938 | 0.0 |
HOH |
3.752 |
HB3 |
O |
|||
1ijb | 1 | P04275 | 99.01 | 4e-134 |
X-RAY |
2002-07-10 | ARG | A:72 | A:571 | 93.0 | NA | -85.0 | 81.9 | 93.0 | NA | NA |
HOH |
4.454 |
CA |
O |
|||
1ijk | 1 | P04275 | 99.01 | 4e-134 |
X-RAY |
2002-07-10 | ARG | A:72 | A:571 | 87.0 | NA | -97.5 | 108.3 | 87.0 | NA | NA |
HOH |
6.341 |
N |
O |
|||
1sq0 | 1 | P04275 | 99.01 | 5e-134 |
X-RAY |
2004-04-13 | ARG | A:76 | A:571 | 238.0 | 1.0 | -106.3 | 89.1 | 87.0 | 0.387 | 0.613 |
B:P07359:0.671 |
HOH |
2.668 |
N |
O |
||
4c2a | 1 | P04275 | 98.48 | 3e-130 |
X-RAY |
2014-01-08 | ARG | A:72 | A:1334 | 241.0 | 1.0 | -102.6 | 78.5 | 131.0 | 0.582 | 0.418 |
B:P07359:0.489 |
HOH |
2.615 |
NH1 |
O |
||
1oak | 3 | P04275 | 99.49 | 1e-128 |
X-RAY |
1998-10-21 | ARG | C:65 | A:571 | 185.0 | 0.822 | -96.4 | 86.8 | 185.0 | 0.822 | 0.0 |
HOH |
2.871 |
N |
O |
|||
1fns | 3 | P04275 | 98.97 | 2e-128 |
X-RAY |
2000-10-18 | ARG | C:65 | A:571 | 184.0 | 0.818 | -96.2 | 93.5 | 184.0 | 0.818 | 0.0 |
HOH |
2.497 |
N |
O |
|||
4c29 | 1 | P04275 | 98.48 | 4e-128 |
X-RAY |
2014-01-08 | ARG | A:72 | A:1334 | 199.0 | 0.884 | -87.7 | 55.5 | 199.0 | 0.884 | 0.0 |
HOH |
3.164 |
CD |
O |
|||
ARG | B:72 | B:1334 | 197.0 | 0.876 | -88.6 | 52.1 | NA | NA | NA | ||||||||||||||
4c2b | 1 | P04275 | 98.48 | 4e-128 |
X-RAY |
2014-01-08 | ARG | A:72 | A:1334 | 228.0 | 1.0 | -106.2 | 74.7 | 125.0 | 0.556 | 0.444 |
B:P07359:0.458 |
||||||
ARG | C:72 | C:1334 | 207.0 | 0.92 | -89.0 | 80.6 | NA | NA | NA | ||||||||||||||
ARG | E:72 | E:1334 | 187.0 | 0.831 | -91.1 | 81.5 | NA | NA | NA | ||||||||||||||
ARG | G:72 | G:1334 | 239.0 | 1.0 | -99.9 | 67.0 | NA | NA | NA | ||||||||||||||
1u0o | 3 | Q8CIZ8 | 87.02 | 2e-119 |
X-RAY |
2005-04-19 | ARG | C:74 | C:571 | 244.0 | 1.0 | -107.5 | -17.3 | 244.0 | 1.0 | 0.0 |
HOH |
6.243 |
N |
O |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p04275-f1 | 1 | P04275 | 99.93 | 0.0 | ARG | A:1334 | A:1334 | 188.0 | 0.836 | -100.4 | 41.0 | ||
af-p04275-f2 | 1 | P04275 | 99.93 | 0.0 | ARG | A:1134 | A:1134 | 228.0 | 1.0 | -94.1 | 68.1 | ||
af-p04275-f3 | 1 | P04275 | 99.93 | 0.0 | ARG | A:934 | A:934 | 197.0 | 0.876 | -92.3 | 71.2 | ||
af-p04275-f6 | 1 | P04275 | 100.0 | 0.0 | ARG | A:334 | A:334 | 172.0 | 0.764 | -88.8 | 67.9 | ||
af-p04275-f5 | 1 | P04275 | 99.93 | 0.0 | ARG | A:534 | A:534 | 145.0 | 0.644 | -96.5 | 69.7 | ||
af-p04275-f7 | 1 | P04275 | 100.0 | 0.0 | ARG | A:134 | A:134 | 147.0 | 0.653 | -91.1 | 83.2 | ||
af-p04275-f4 | 1 | P04275 | 99.93 | 0.0 | ARG | A:734 | A:734 | 229.0 | 1.0 | -90.1 | 67.9 |