Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr12 6128614 . C A CCDS8539.1:NM_000552.3:c.3970Ggc>Tgc_NP_000543.2:p.1324G>C Homo sapiens von Willebrand factor (VWF), mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5bv8 1 P04275 99.11 3e-149 X-RAY
2015-12-23 SER A:99 A:1324 56.0 0.487 S -138.0 171.0 56.0 0.487 0.0 HOH
3.563
C
O
7f49 1 P04275 99.05 2e-140 X-RAY
2021-07-07 GLY A:66 A:561 18.0 0.24 S -127.9 177.4 18.0 0.24 0.0 OMC
HOH
5.139
3.686
N
CA
N4
O
1uex 3 P04275 99.52 3e-140 X-RAY
2003-09-30 GLY C:65 C:561 22.0 0.293 S -135.3 -165.6 22.0 0.293 0.0
3hxo 1 P04275 99.52 3e-140 X-RAY
2009-11-17 GLY A:65 A:561 22.0 0.293 S -142.8 176.0 22.0 0.293 0.0 HOH
3.838
C
O
3hxq 1 P04275 99.52 3e-140 X-RAY
2009-11-17 GLY A:65 A:561 27.0 0.36 S 117.4 157.1 27.0 0.36 0.0 HOH
3.617
N
O
7eow 1 P04275 100.0 7e-140 X-RAY
2021-07-07 GLY A:88 A:88 26.0 0.347 S 120.9 170.0 26.0 0.347 0.0 HOH
3.315
O
O
1auq 1 P04275 99.52 1e-139 X-RAY
1998-10-14 GLY A:64 A:561 33.0 0.44 S -126.2 -159.0 33.0 0.44 0.0 CD
HOH
4.598
4.036
N
CA
CD
O
1u0n 1 P04275 99.52 1e-139 X-RAY
2005-04-19 GLY A:64 A:561 25.0 0.333 S -106.3 -168.4 1.0 0.013 0.32 D:P07359:0.32
1m10 1 P04275 99.04 7e-139 X-RAY
2002-08-28 GLY A:64 A:561 25.0 0.333 S 70.7 163.8 1.0 0.013 0.32 B:P07359:0.32
7a6o 1 L8E853 99.51 5e-137 X-RAY
2021-03-03 GLY A:63 AAA:1324 16.0 0.213 S -138.5 175.0 16.0 0.213 0.0 HOH
9.001
O
O
1ijb 1 P04275 99.01 4e-134 X-RAY
2002-07-10 GLY A:62 A:561 25.0 0.333 S 125.9 -174.5 25.0 0.333 0.0 HOH
2.879
O
O
1ijk 1 P04275 99.01 4e-134 X-RAY
2002-07-10 GLY A:62 A:561 30.0 0.4 S -133.7 -168.8 30.0 0.4 0.0 HOH
2.885
O
O
1sq0 1 P04275 99.01 5e-134 X-RAY
2004-04-13 GLY A:66 A:561 25.0 0.333 S -122.6 -164.4 1.0 0.013 0.32 B:P07359:0.32
HOH
2.839
N
O
4c2a 1 P04275 98.48 3e-130 X-RAY
2014-01-08 GLY A:62 A:1324 28.0 0.373 S -137.4 -173.7 3.0 0.04 0.333 B:P07359:0.333
HOH
2.854
N
O
1oak 3 P04275 99.49 1e-128 X-RAY
1998-10-21 GLY C:55 A:561 26.0 0.347 S -129.0 -171.3 26.0 0.347 0.0 HOH
3.647
C
O
1fns 3 P04275 98.97 2e-128 X-RAY
2000-10-18 GLY C:55 A:561 31.0 0.413 S 112.7 179.2 31.0 0.413 0.0 HOH
3.090
O
O
4c29 1 P04275 98.48 4e-128 X-RAY
2014-01-08 GLY A:62 A:1324 27.0 0.36 S -115.4 -168.5 27.0 0.36 0.0 HOH
3.006
O
O
GLY B:62 B:1324 30.0 0.4 S -115.7 -167.3 NA NA NA
4c2b 1 P04275 98.48 4e-128 X-RAY
2014-01-08 GLY A:62 A:1324 19.0 0.253 S -132.6 -144.7 1.0 0.013 0.24 B:P07359:0.24
GLY C:62 C:1324 21.0 0.28 S -130.7 -150.4 NA NA NA
GLY E:62 E:1324 27.0 0.36 S -149.9 179.6 NA NA NA
GLY G:62 G:1324 22.0 0.293 S -120.9 -144.6 NA NA NA
1u0o 3 Q8CIZ8 87.02 2e-119 X-RAY
2005-04-19 GLY C:64 C:561 22.0 0.293 S -131.3 -176.9 22.0 0.293 0.0 HOH
3.716
CA
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p04275-f1 1 P04275 99.93 0.0 GLY A:1324 A:1324 31.0 0.413 S -122.5 -172.3
af-p04275-f2 1 P04275 99.93 0.0 GLY A:1124 A:1124 25.0 0.333 S -127.1 -167.7
af-p04275-f3 1 P04275 99.93 0.0 GLY A:924 A:924 25.0 0.333 S -131.3 -169.0
af-p04275-f6 1 P04275 100.0 0.0 GLY A:324 A:324 17.0 0.227 S -125.6 -165.6
af-p04275-f5 1 P04275 99.93 0.0 GLY A:524 A:524 7.0 0.093 S -129.8 -165.5
af-p04275-f7 1 P04275 100.0 0.0 GLY A:124 A:124 24.0 0.32 S -110.6 -161.9
af-p04275-f4 1 P04275 99.93 0.0 GLY A:724 A:724 24.0 0.32 S -129.6 -167.4