Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr12 | 6128638 | . | C | A | CCDS8539.1:NM_000552.3:c.3946Gtg>Ttg_NP_000543.2:p.1316V>L | Homo sapiens von Willebrand factor (VWF), mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
5bv8 | 1 | P04275 | 99.11 | 3e-149 |
X-RAY |
2015-12-23 | VAL | A:91 | A:1316 | 4.0 | 0.026 | E | -127.6 | 148.9 | 4.0 | 0.026 | 0.0 |
HOH |
2.956 |
N |
O |
||
7f49 | 1 | P04275 | 99.05 | 2e-140 |
X-RAY |
2021-07-07 | VAL | A:58 | A:553 | 3.0 | 0.019 | E | -124.5 | 144.9 | 3.0 | 0.019 | 0.0 |
HOH |
2.827 |
N |
O |
||
1uex | 3 | P04275 | 99.52 | 3e-140 |
X-RAY |
2003-09-30 | VAL | C:57 | C:553 | 4.0 | 0.026 | E | -128.8 | 146.2 | 4.0 | 0.026 | 0.0 | ||||||
3hxo | 1 | P04275 | 99.52 | 3e-140 |
X-RAY |
2009-11-17 | VAL | A:57 | A:553 | 4.0 | 0.026 | E | -119.7 | 148.5 | 4.0 | 0.026 | 0.0 |
HOH |
3.031 |
N |
O |
||
3hxq | 1 | P04275 | 99.52 | 3e-140 |
X-RAY |
2009-11-17 | VAL | A:57 | A:553 | 4.0 | 0.026 | E | -134.1 | 142.7 | 4.0 | 0.026 | 0.0 |
HOH |
2.853 |
N |
O |
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7eow | 1 | P04275 | 100.0 | 7e-140 |
X-RAY |
2021-07-07 | VAL | A:80 | A:80 | 3.0 | 0.019 | E | -125.5 | 150.2 | 3.0 | 0.019 | 0.0 |
HOH |
2.992 |
N |
O |
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1auq | 1 | P04275 | 99.52 | 1e-139 |
X-RAY |
1998-10-14 | VAL | A:56 | A:553 | 4.0 | 0.026 | E | -128.4 | 150.0 | 4.0 | 0.026 | 0.0 |
HOH |
5.753 |
N |
O |
||
1u0n | 1 | P04275 | 99.52 | 1e-139 |
X-RAY |
2005-04-19 | VAL | A:56 | A:553 | 5.0 | 0.032 | -91.5 | 168.7 | 5.0 | 0.032 | 0.0 | |||||||
1m10 | 1 | P04275 | 99.04 | 7e-139 |
X-RAY |
2002-08-28 | VAL | A:56 | A:553 | 6.0 | 0.039 | E | -149.8 | 170.2 | 6.0 | 0.039 | 0.0 | ||||||
7a6o | 1 | L8E853 | 99.51 | 5e-137 |
X-RAY |
2021-03-03 | VAL | A:55 | AAA:1316 | 3.0 | 0.019 | E | -119.2 | 145.1 | 3.0 | 0.019 | 0.0 |
HOH |
1.877 |
H |
O |
||
1ijb | 1 | P04275 | 99.01 | 4e-134 |
X-RAY |
2002-07-10 | VAL | A:54 | A:553 | 4.0 | 0.026 | E | -129.9 | 154.1 | 4.0 | 0.026 | 0.0 |
HOH |
2.923 |
N |
O |
||
1ijk | 1 | P04275 | 99.01 | 4e-134 |
X-RAY |
2002-07-10 | VAL | A:54 | A:553 | 4.0 | 0.026 | E | -127.5 | 155.4 | 4.0 | 0.026 | 0.0 |
HOH |
2.843 |
N |
O |
||
1sq0 | 1 | P04275 | 99.01 | 5e-134 |
X-RAY |
2004-04-13 | VAL | A:58 | A:553 | 8.0 | 0.052 | E | -118.1 | 160.6 | 8.0 | 0.052 | 0.0 |
HOH |
3.433 |
O |
O |
||
4c2a | 1 | P04275 | 98.48 | 3e-130 |
X-RAY |
2014-01-08 | VAL | A:54 | A:1316 | 0.0 | 0.0 | E | -129.8 | 154.5 | 0.0 | 0.0 | 0.0 |
HOH |
5.926 |
O |
O |
||
1oak | 3 | P04275 | 99.49 | 1e-128 |
X-RAY |
1998-10-21 | VAL | C:47 | A:553 | 4.0 | 0.026 | E | -133.8 | 149.6 | 4.0 | 0.026 | 0.0 |
HOH |
3.280 |
O |
O |
||
1fns | 3 | P04275 | 98.97 | 2e-128 |
X-RAY |
2000-10-18 | VAL | C:47 | A:553 | 4.0 | 0.026 | E | -131.4 | 156.4 | 4.0 | 0.026 | 0.0 |
HOH |
2.862 |
N |
O |
||
4c29 | 1 | P04275 | 98.48 | 4e-128 |
X-RAY |
2014-01-08 | VAL | A:54 | A:1316 | 4.0 | 0.026 | E | -121.6 | 154.0 | 4.0 | 0.026 | 0.0 |
HOH |
3.037 |
N |
O |
||
VAL | B:54 | B:1316 | 3.0 | 0.019 | E | -122.2 | 153.3 | NA | NA | NA | |||||||||||||
4c2b | 1 | P04275 | 98.48 | 4e-128 |
X-RAY |
2014-01-08 | VAL | A:54 | A:1316 | 4.0 | 0.026 | E | -116.2 | 158.6 | 4.0 | 0.026 | 0.0 | ||||||
VAL | C:54 | C:1316 | 4.0 | 0.026 | E | -106.6 | 157.8 | NA | NA | NA | |||||||||||||
VAL | E:54 | E:1316 | 4.0 | 0.026 | E | -108.9 | 154.5 | NA | NA | NA | |||||||||||||
VAL | G:54 | G:1316 | 6.0 | 0.039 | E | -114.0 | 156.5 | NA | NA | NA | |||||||||||||
1u0o | 3 | Q8CIZ8 | 87.02 | 2e-119 |
X-RAY |
2005-04-19 | VAL | C:56 | C:553 | 4.0 | 0.026 | E | -124.4 | 146.0 | 4.0 | 0.026 | 0.0 |
HOH |
2.932 |
O |
O |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p04275-f1 | 1 | P04275 | 99.93 | 0.0 | VAL | A:1316 | A:1316 | 5.0 | 0.032 | E | -123.8 | 134.1 | |
af-p04275-f2 | 1 | P04275 | 99.93 | 0.0 | VAL | A:1116 | A:1116 | 4.0 | 0.026 | E | -121.3 | 145.1 | |
af-p04275-f3 | 1 | P04275 | 99.93 | 0.0 | VAL | A:916 | A:916 | 5.0 | 0.032 | E | -122.1 | 147.0 | |
af-p04275-f6 | 1 | P04275 | 100.0 | 0.0 | VAL | A:316 | A:316 | 4.0 | 0.026 | E | -113.3 | 144.3 | |
af-p04275-f5 | 1 | P04275 | 99.93 | 0.0 | VAL | A:516 | A:516 | 6.0 | 0.039 | E | -119.0 | 143.8 | |
af-p04275-f7 | 1 | P04275 | 100.0 | 0.0 | VAL | A:116 | A:116 | 6.0 | 0.039 | E | -115.8 | 148.9 | |
af-p04275-f4 | 1 | P04275 | 99.93 | 0.0 | VAL | A:716 | A:716 | 5.0 | 0.032 | E | -122.2 | 145.1 |