Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr12 6978100 . C A CCDS53740.1:NM_001159287.1:c.299gCt>gAt_NP_001152759.1:p.100A>D Homo sapiens triosephosphate isomerase 1 (TPI1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6up1 1 P60174 100.0 0.0 X-RAY
 2020-07-01 ALA A:66 A:62 0.0 0.0 E -117.7 143.2 0.0 0.0 0.0 HOH
 4.524
 O
 O
ALA B:66 B:62 0.0 0.0 E -119.6 134.2 0.0 0.0 0.0 HOH
 4.448
 O
 O
6up5 1 P60174 100.0 0.0 X-RAY
 2020-07-01 ALA A:66 A:62 0.0 0.0 E -119.5 141.0 0.0 0.0 0.0 HOH
 4.637
 O
 O
ALA B:66 B:62 1.0 0.009 E -122.6 139.9 1.0 0.009 0.0 HOH
 4.473
 O
 O
4poc 1 P60174 100.0 0.0 X-RAY
 2015-01-14 ALA A:68 A:62 0.0 0.0 E -121.8 143.6 0.0 0.0 0.0 HOH
 4.422
 O
 O
ALA B:68 B:62 1.0 0.009 E -123.0 147.0 1.0 0.009 0.0 HOH
 4.572
 O
 O
6c2g 1 P60174 99.6 0.0 X-RAY
 2018-03-21 ALA A:63 A:62 0.0 0.0 E -119.0 144.5 0.0 0.0 0.0 HOH
 4.613
 O
 O
ALA B:63 B:62 1.0 0.009 E -119.4 144.2 NA NA NA
ALA C:63 C:62 0.0 0.0 E -117.9 144.0 NA NA NA
ALA D:63 D:62 0.0 0.0 E -118.7 144.0 NA NA NA
4pod 1 P60174 99.6 0.0 X-RAY
 2015-01-14 ALA A:68 A:62 0.0 0.0 E -125.5 148.3 0.0 0.0 0.0 HOH
 4.501
 O
 O
ALA B:68 B:62 0.0 0.0 E -123.1 149.4 0.0 0.0 0.0 HOH
 4.491
 O
 O
1wyi 1 P60174 100.0 0.0 X-RAY
 2005-04-12 ALA A:64 A:62 0.0 0.0 E -131.0 137.9 0.0 0.0 0.0 HOH
 4.882
 O
 O
ALA B:64 B:62 0.0 0.0 E -136.8 127.9 0.0 0.0 0.0 HOH
 4.565
 O
 O
2jk2 1 P60174 100.0 0.0 X-RAY
 2008-07-01 ALA A:64 A:62 0.0 0.0 E -122.0 144.6 0.0 0.0 0.0 HOH
 4.500
 O
 O
ALA B:64 B:62 0.0 0.0 E -120.3 144.5 0.0 0.0 0.0 HOH
 4.533
 O
 O
6up8 1 P60174 99.6 0.0 X-RAY
 2020-07-01 ALA A:66 A:62 0.0 0.0 E -114.8 140.5 0.0 0.0 0.0 HOH
 4.536
 O
 O
ALA B:66 B:62 0.0 0.0 E -118.2 146.0 0.0 0.0 0.0 HOH
 4.293
 O
 O
6upf 1 P60174 99.6 0.0 X-RAY
 2020-07-01 ALA A:66 A:62 0.0 0.0 E -115.6 145.4 0.0 0.0 0.0 HOH
 4.481
 O
 O
ALA B:66 B:62 0.0 0.0 E -116.1 142.6 0.0 0.0 0.0 HOH
 4.505
 O
 O
1hti 1 P60174 100.0 0.0 X-RAY
 1995-01-26 ALA A:62 A:62 0.0 0.0 E -142.3 148.2 0.0 0.0 0.0
ALA B:62 B:62 1.0 0.009 E -125.7 138.8 1.0 0.009 0.0
4zvj 1 P60174 99.6 0.0 X-RAY
 2016-03-09 ALA A:68 A:62 1.0 0.009 E -119.8 142.7 1.0 0.009 0.0 HOH
 4.477
 O
 O
ALA B:68 B:62 0.0 0.0 E -119.3 142.9 0.0 0.0 0.0 HOH
 4.498
 O
 O
2vom 1 P60174 99.6 0.0 X-RAY
 2008-06-17 ALA A:64 A:62 0.0 0.0 E -126.3 148.6 0.0 0.0 0.0 HOH
 4.384
 O
 O
ALA B:64 B:62 0.0 0.0 E -125.0 150.2 0.0 0.0 0.0 HOH
 4.335
 O
 O
ALA C:64 C:62 0.0 0.0 E -127.5 144.5 NA NA NA
ALA D:64 D:62 0.0 0.0 E -130.6 147.9 NA NA NA
4unk 1 P60174 99.6 0.0 X-RAY
 2015-02-04 ALA A:64 A:62 0.0 0.0 E -120.5 144.6 0.0 0.0 0.0 HOH
 4.536
 O
 O
ALA B:64 B:62 0.0 0.0 E -118.7 146.2 0.0 0.0 0.0 HOH
 4.560
 O
 O
4unl 1 P60174 99.6 0.0 X-RAY
 2015-02-04 ALA A:62 A:62 0.0 0.0 E -120.6 143.8 0.0 0.0 0.0 HOH
 4.459
 O
 O
ALA B:62 B:62 1.0 0.009 E -119.5 145.3 1.0 0.009 0.0 HOH
 4.458
 O
 O
4br1 1 P60174 100.0 0.0 X-RAY
 2013-06-12 ALA A:60 A:62 0.0 0.0 E -119.5 144.1 0.0 0.0 0.0 HOH
 4.442
 O
 O
ALA B:60 B:62 1.0 0.009 E -117.6 144.4 1.0 0.009 0.0 HOH
 4.532
 O
 O
6d43 1 P60174 100.0 0.0 X-RAY
 2018-05-16 ALA A:60 A:62 0.0 0.0 E -123.1 138.6 0.0 0.0 0.0 HOH
 4.509
 O
 O
6d43 2 P60174 100.0 0.0 X-RAY
 2018-05-16 ALA B:60 B:62 1.0 0.009 E -124.1 143.9 1.0 0.009 0.0 HOH
 4.418
 O
 O
1r2r 1 P00939 98.39 0.0 X-RAY
 2003-12-23 ALA A:62 A:62 0.0 0.0 E -119.1 143.7 0.0 0.0 0.0 DMS
HOH
 8.688
4.462
 CB
O
 O
O
ALA B:62 B:62 0.0 0.0 E -118.1 145.1 0.0 0.0 0.0 DMS
HOH
 8.926
4.581
 CB
O
 O
O
ALA C:62 C:62 0.0 0.0 E -116.3 141.1 NA NA NA
ALA D:62 D:62 0.0 0.0 E -118.8 145.4 NA NA NA
1r2s 1 P00939 98.39 0.0 X-RAY
 2003-12-23 ALA A:62 A:62 0.0 0.0 E -124.1 150.9 0.0 0.0 0.0 HOH
 4.562
 O
 O
ALA B:62 B:62 0.0 0.0 E -120.0 151.3 0.0 0.0 0.0 HOH
 4.357
 O
 O
ALA C:62 C:62 0.0 0.0 E -120.5 144.4 NA NA NA
ALA D:62 D:62 1.0 0.009 E -120.4 153.6 NA NA NA
1r2t 1 P00939 98.39 0.0 X-RAY
 2003-12-23 ALA A:62 A:62 0.0 0.0 E -122.0 141.2 0.0 0.0 0.0 HOH
 4.454
 O
 O
ALA B:62 B:62 0.0 0.0 E -125.2 143.4 0.0 0.0 0.0 HOH
 4.396
 O
 O
4owg 1 P00939 98.39 0.0 X-RAY
 2014-03-05 ALA A:62 A:62 0.0 0.0 E -116.5 147.4 0.0 0.0 0.0 HOH
 4.534
 O
 O
ALA B:62 B:62 0.0 0.0 E -120.0 144.4 0.0 0.0 0.0 HOH
 4.534
 O
 O
6nlh 1 P60174 99.59 0.0 X-RAY
 2019-06-19 ALA A:59 A:62 0.0 0.0 E -126.0 139.1 0.0 0.0 0.0 HOH
 4.514
 O
 O
ALA B:59 E:62 0.0 0.0 E -127.8 141.9 0.0 0.0 0.0 HOH
 4.412
 O
 O
ALA C:59 B:62 0.0 0.0 E -121.5 143.7 NA NA NA
ALA D:59 C:62 1.0 0.009 E -122.2 141.1 NA NA NA
ALA E:59 D:62 1.0 0.009 E -123.5 142.2 NA NA NA
ALA F:59 F:62 0.0 0.0 E -124.6 137.3 NA NA NA
ALA G:59 G:62 0.0 0.0 E -119.0 147.0 NA NA NA
ALA H:59 H:62 1.0 0.009 E -121.5 144.9 NA NA NA
1sw3 1 P00940 89.16 1e-162 X-RAY
 2004-08-24 ALA A:62 A:62 1.0 0.009 E -123.2 142.4 1.0 0.009 0.0 HOH
 4.633
 O
 O
ALA B:62 B:62 0.0 0.0 E -121.9 141.9 0.0 0.0 0.0 HOH
 4.542
 O
 O
1tph 1 P00940 89.39 7e-162 X-RAY
 1994-04-30 ALA A:61 1:62 1.0 0.009 E -124.6 143.1 1.0 0.009 0.0 HOH
 4.671
 O
 O
ALA B:61 2:62 0.0 0.0 E -130.9 145.5 0.0 0.0 0.0 HOH
 4.590
 O
 O
8tim 1 P00940 89.39 7e-162 X-RAY
 1999-02-16 ALA A:61 A:62 3.0 0.026 E -121.7 141.1 3.0 0.026 0.0 HOH
 5.907
 N
 O
ALA B:61 B:62 1.0 0.009 E -117.8 140.4 1.0 0.009 0.0 HOH
 9.308
 CA
 O
1sw7 1 P00940 88.35 8e-162 X-RAY
 2004-08-24 ALA A:62 A:62 0.0 0.0 E -117.3 136.4 0.0 0.0 0.0 HOH
 4.607
 O
 O
ALA B:62 B:62 0.0 0.0 E -115.4 138.6 0.0 0.0 0.0 HOH
 4.710
 O
 O
1spq 1 P00940 89.39 1e-161 X-RAY
 2004-08-24 ALA A:61 A:62 0.0 0.0 E -123.2 137.9 0.0 0.0 0.0 HOH
 4.820
 O
 O
ALA B:61 B:62 1.0 0.009 E -124.4 139.6 1.0 0.009 0.0 HOH
 4.575
 O
 O
1tpb 1 P00940 88.98 2e-161 X-RAY
 1995-02-14 ALA A:61 1:62 0.0 0.0 E -124.4 146.6 0.0 0.0 0.0 HOH
 4.646
 O
 O
ALA B:61 2:62 0.0 0.0 E -127.2 149.1 0.0 0.0 0.0 HOH
 4.549
 O
 O
1sw0 1 P00940 88.76 6e-161 X-RAY
 2004-08-24 ALA A:62 A:62 1.0 0.009 E -119.8 143.0 1.0 0.009 0.0 HOH
 4.814
 O
 O
ALA B:62 B:62 0.0 0.0 E -119.6 141.3 0.0 0.0 0.0 HOH
 4.595
 O
 O
1tpw 1 P00940 88.98 8e-161 X-RAY
 1995-04-20 ALA A:61 A:62 0.0 0.0 E -132.2 142.9 0.0 0.0 0.0 HOH
 4.931
 O
 O
ALA B:61 B:62 0.0 0.0 E -122.3 150.1 0.0 0.0 0.0 HOH
 4.823
 O
 O
1tpu 1 P00940 88.98 1e-160 X-RAY
 1995-04-20 ALA A:61 A:62 0.0 0.0 E -123.6 138.7 0.0 0.0 0.0 HOH
 4.819
 O
 O
ALA B:61 B:62 0.0 0.0 E -120.9 142.7 0.0 0.0 0.0 HOH
 4.568
 O
 O
4p61 1 P00940 88.76 2e-160 X-RAY
 2014-08-27 ALA A:62 A:62 0.0 0.0 E -118.0 136.1 0.0 0.0 0.0 HOH
 4.642
 O
 O
ALA B:62 B:62 0.0 0.0 E -115.9 140.3 0.0 0.0 0.0 HOH
 4.668
 O
 O
1tpc 1 P00940 88.57 2e-160 X-RAY
 1995-02-14 ALA A:61 1:62 1.0 0.009 E -122.7 150.0 1.0 0.009 0.0 HOH
 4.726
 O
 O
ALA B:61 2:62 0.0 0.0 E -125.1 143.2 0.0 0.0 0.0 HOH
 4.629
 O
 O
1ssd 1 P00940 88.57 3e-160 X-RAY
 2004-08-24 ALA A:61 A:62 1.0 0.009 E -123.8 140.3 1.0 0.009 0.0 HOH
 4.697
 O
 O
ALA B:61 B:62 0.0 0.0 E -121.8 139.6 0.0 0.0 0.0 HOH
 4.757
 O
 O
1ssg 1 P00940 88.57 3e-160 X-RAY
 2004-08-24 ALA A:61 A:62 0.0 0.0 E -123.0 141.0 0.0 0.0 0.0 HOH
 4.858
 O
 O
ALA B:61 B:62 0.0 0.0 E -121.1 139.5 0.0 0.0 0.0 HOH
 4.514
 O
 O
1sq7 1 P00940 88.98 4e-160 X-RAY
 2004-08-24 ALA A:61 A:62 0.0 0.0 E -128.0 137.6 0.0 0.0 0.0 HOH
 4.644
 O
 O
ALA B:61 B:62 0.0 0.0 E -125.5 142.3 0.0 0.0 0.0 HOH
 4.587
 O
 O
1tpv 1 P00940 88.57 1e-159 X-RAY
 1995-04-20 ALA A:61 A:62 0.0 0.0 E -123.5 136.9 0.0 0.0 0.0 HOH
 4.603
 O
 O
ALA B:61 B:62 0.0 0.0 E -119.9 141.0 0.0 0.0 0.0 HOH
 4.500
 O
 O
1su5 1 P00940 88.57 1e-159 X-RAY
 2004-08-24 ALA A:61 A:62 0.0 0.0 E -116.8 131.7 0.0 0.0 0.0 HOH
 4.915
 O
 O
ALA B:61 B:62 0.0 0.0 E -115.9 136.5 0.0 0.0 0.0 HOH
 4.817
 O
 O
1tim 1 P00940 86.53 5e-158 X-RAY
 1976-10-15 ALA A:61 A:62 3.0 0.026 E -116.4 141.3 3.0 0.026 0.0
ALA B:61 B:62 2.0 0.017 E -131.5 161.3 2.0 0.017 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p60174-f1 1 P60174 100.0 0.0 ALA A:63 A:63 0.0 0.0 E -116.3 150.4