Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr14 76425550 . T A CCDS9846.1:NM_003239.2:c.1219Aag>Tag_NP_003230.1:p.407K>* Homo sapiens transforming growth factor, beta 3 (TGFB3), mRNA.
pdb_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1ktz 1 P10600 100.0 5e-80 X-RAY
 2002-02-27 LYS A:107 A:107 116.0 0.58 -103.0 -31.0 116.0 0.58 0.0 HOH
 3.630
 O
 O
1tgj 1 P10600 100.0 5e-80 X-RAY
 1997-01-11 LYS A:107 A:107 59.0 0.295 -103.6 -23.4 59.0 0.295 0.0 HOH
 3.626
 NZ
 O
1tgk 1 P10600 100.0 5e-80 X-RAY
 1997-03-12 LYS A:107 A:107 61.0 0.305 E -131.3 -26.4 61.0 0.305 0.0
2pjy 1 P10600 100.0 5e-80 X-RAY
 2008-02-05 LYS A:107 A:107 79.0 0.395 -127.1 -19.5 79.0 0.395 0.0
3eo1 3 P10600 100.0 5e-80 X-RAY
 2008-12-02 LYS C:107 C:107 78.0 0.39 E -92.0 -19.6 78.0 0.39 0.0
LYS F:107 F:107 79.0 0.395 E -119.1 -36.0 79.0 0.395 0.0
LYS I:107 I:107 78.0 0.39 E -92.0 -19.6 NA NA NA
LYS L:107 L:107 77.0 0.385 E -119.0 -36.1 NA NA NA
5ty4 2 ? 83.51 6e-57 ELECTRON CRYSTALLOGRAPHY
 2017-04-26 LYS B:93 B:407 73.0 0.365 -131.5 -85.1 73.0 0.365 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p10600-f1 1 P10600 100.0 0.0 LYS A:407 A:407 82.0 0.41 -92.9 -46.6