Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr14 76425567 . A C CCDS9846.1:NM_003239.2:c.1202cTc>cGc_NP_003230.1:p.401L>R Homo sapiens transforming growth factor, beta 3 (TGFB3), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1ktz 1 P10600 100.0 5e-80 X-RAY
 2002-02-27 LEU A:101 A:101 29.0 0.171 E -96.8 132.9 29.0 0.171 0.0 HOH
 5.847
 N
 O
1tgj 1 P10600 100.0 5e-80 X-RAY
 1997-01-11 LEU A:101 A:101 33.0 0.194 E -96.9 133.6 26.0 0.153 0.041 A:P10600:0.041
 DIO
HOH
 4.364
3.767
 CD2
CA
 C1'
O
1tgk 1 P10600 100.0 5e-80 X-RAY
 1997-03-12 LEU A:101 A:101 47.0 0.276 E -82.8 143.8 44.0 0.259 0.017 A:P10600:0.018
2pjy 1 P10600 100.0 5e-80 X-RAY
 2008-02-05 LEU A:101 A:101 46.0 0.271 E -97.1 117.2 10.0 0.059 0.212 A:P10600:0.035
C:P36897:0.2
3eo1 3 P10600 100.0 5e-80 X-RAY
 2008-12-02 LEU C:101 C:101 40.0 0.235 E -77.2 137.0 7.0 0.041 0.194 B:None:0.194
LEU F:101 F:101 39.0 0.229 E -66.3 131.1 11.0 0.065 0.164 E:None:0.159
C:P10600:0.012
LEU I:101 I:101 40.0 0.235 E -77.3 137.1 NA NA NA
LEU L:101 L:101 38.0 0.224 E -66.4 131.1 NA NA NA
5ty4 2 ? 83.51 6e-57 ELECTRON CRYSTALLOGRAPHY
 2017-04-26 LEU B:87 B:401 50.0 0.294 E -96.9 107.5 50.0 0.294 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p10600-f1 1 P10600 100.0 0.0 LEU A:401 A:401 0.0 0.0 E -88.7 119.7