Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr14 102360859 . G A CCDS53911.1:NM_001161726.1:c.979Gtg>Atg_NP_001155198.1:p.327V>M Homo sapiens protein phosphatase 2 regulatory subunit B', gamma (PPP2R5C), transcript variant 1, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2npp 2 Q13362 100.0 0.0 X-RAY
2006-12-12 VAL B:272 B:262 11.0 0.071 H -66.2 -58.4 NA NA NA
VAL E:272 E:262 13.0 0.084 H -67.9 -58.5 13.0 0.084 0.0
2iae 2 Q13362 100.0 0.0 X-RAY
2006-12-26 VAL B:243 B:272 20.0 0.129 H -65.1 -29.6 20.0 0.129 0.0
VAL E:243 E:272 23.0 0.148 H -80.5 7.8 NA NA NA
3fga 2 Q13362 100.0 0.0 X-RAY
2009-09-22 VAL B:239 B:262 22.0 0.142 H -55.6 -43.5 22.0 0.142 0.0
2nyl 2 Q13362 100.0 0.0 X-RAY
2006-12-12 VAL B:235 B:262 16.0 0.103 H -62.8 -62.3 16.0 0.103 0.0
VAL E:235 E:262 15.0 0.097 H -48.8 -71.2 NA NA NA
2nym 2 Q13362 100.0 0.0 X-RAY
2006-12-12 VAL B:235 B:262 15.0 0.097 H -54.9 -60.9 15.0 0.097 0.0
VAL E:235 E:262 13.0 0.084 H -44.1 -66.1 NA NA NA
7ouf 2 O75475,Q13362 100.0 0.0 EM
2021-08-18 VAL C:589 F:272 39.0 0.252 H -60.1 -27.9 31.0 0.2 0.052 A:Q4QY51:0.052
VAL H:589 C:272 38.0 0.245 H -60.0 -27.9 30.0 0.194 0.051 F:Q4QY51:0.052
7oug 2 O75475,Q13362 100.0 0.0 EM
2021-08-18 VAL C:589 F:272 36.0 0.232 H -65.6 -28.4 30.0 0.194 0.038 A:Q4QY51:0.039
VAL H:589 C:272 38.0 0.245 H -65.6 -28.5 31.0 0.2 0.045 F:Q4QY51:0.045
7ouh 2 ? 100.0 0.0 EM
2021-08-18 VAL C:589 F:272 27.0 0.174 H -66.6 -10.3 21.0 0.135 0.039 A:Q4QY51:0.039
VAL H:589 C:272 30.0 0.194 H -66.7 -10.3 23.0 0.148 0.046 F:Q4QY51:0.045
7pel 2 O75475,Q13362 100.0 0.0 EM
2021-08-25 VAL C:589 C:272 31.0 0.2 H -66.3 -35.0 24.0 0.155 0.045 A:Q4QY51:0.045
VAL H:589 F:272 30.0 0.194 H -66.3 -35.1 24.0 0.155 0.039 F:Q4QY51:0.039
6toq 2 Q13362 100.0 0.0 X-RAY
2020-10-21 VAL B:262 AAA:272 14.0 0.09 H -71.7 -18.6 14.0 0.09 0.0
2jak 1 Q13362 98.41 0.0 X-RAY
2006-12-04 VAL A:284 A:272 6.0 0.039 H -60.1 -42.6 6.0 0.039 0.0
5jja 1 Q13362 100.0 0.0 X-RAY
2016-07-13 VAL A:244 A:272 13.0 0.084 H -65.3 -42.1 13.0 0.084 0.0 HOH
3.689
CG1
O
VAL B:244 B:272 13.0 0.084 H -61.9 -38.8 NA NA NA
5k6s 1 Q13362 100.0 0.0 X-RAY
2016-12-07 VAL A:247 A:272 15.0 0.097 H -64.9 -44.7 15.0 0.097 0.0
5sw9 1 Q13362 100.0 0.0 X-RAY
2016-11-30 VAL A:247 A:272 13.0 0.084 H -66.0 -45.2 13.0 0.084 0.0
5swf 1 Q13362 100.0 0.0 X-RAY
2016-11-30 VAL A:247 A:272 13.0 0.084 H -63.2 -45.1 13.0 0.084 0.0 HOH
8.415
O
O
6oyl 1 Q13362 100.0 0.0 X-RAY
2020-03-25 VAL A:247 A:272 19.0 0.123 H -72.0 -41.3 19.0 0.123 0.0
6vro 1 Q13362 100.0 0.0 X-RAY
2020-03-25 VAL A:247 A:272 13.0 0.084 H -72.4 -26.7 13.0 0.084 0.0 HOH
7.155
CG1
O
6voy 2 Q13362 100.0 0.0 EM
2020-07-01 VAL E:243 E:272 39.0 0.252 H -76.9 -41.1 39.0 0.252 0.0
VAL F:243 F:272 37.0 0.239 H -75.1 -41.1 37.0 0.239 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q13362-f1 1 Q13362 100.0 0.0 VAL A:272 A:272 14.0 0.09 H -58.9 -43.9
af-q14738-f1 1 Q14738 81.45 0.0 VAL A:348 A:348 16.0 0.103 H -58.2 -44.7