Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr14 102372825 . G A CCDS53911.1:NM_001161726.1:c.1275atG>atA_NP_001155198.1:p.425M>I Homo sapiens protein phosphatase 2 regulatory subunit B', gamma (PPP2R5C), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2npp 2 Q13362 100.0 0.0 X-RAY
 2006-12-12 MET B:370 B:360 0.0 0.0 H -77.2 -41.6 NA NA NA
MET E:370 E:360 0.0 0.0 H -79.0 -46.4 0.0 0.0 0.0
2iae 2 Q13362 100.0 0.0 X-RAY
 2006-12-26 MET B:341 B:370 52.0 NA T -88.6 -54.7 52.0 NA NA
MET E:341 E:370 52.0 NA T -68.1 10.6 NA NA NA
3fga 2 Q13362 100.0 0.0 X-RAY
 2009-09-22 MET B:337 B:360 0.0 0.0 H -74.8 -34.0 0.0 0.0 0.0
2nyl 2 Q13362 100.0 0.0 X-RAY
 2006-12-12 MSE B:333 B:360 0.0 0.0 H -81.5 -51.3 0.0 0.0 0.0
MSE E:333 E:360 0.0 0.0 H -73.1 -56.2 NA NA NA
2nym 2 Q13362 100.0 0.0 X-RAY
 2006-12-12 MSE B:333 B:360 0.0 0.0 H -91.1 -19.8 0.0 0.0 0.0
MSE E:333 E:360 0.0 0.0 H -92.2 -19.3 NA NA NA
7ouf 2 O75475,Q13362 100.0 0.0 EM
 2021-08-18 MET C:687 NA:NA DO NA DO DO DO NA NA NA
MET H:687 NA:NA DO NA DO DO DO NA NA NA
7oug 2 O75475,Q13362 100.0 0.0 EM
 2021-08-18 MET C:687 NA:NA DO NA DO DO DO NA NA NA
MET H:687 NA:NA DO NA DO DO DO NA NA NA
7ouh 2 ? 100.0 0.0 EM
 2021-08-18 MET C:687 NA:NA DO NA DO DO DO NA NA NA
MET H:687 NA:NA DO NA DO DO DO NA NA NA
7pel 2 O75475,Q13362 100.0 0.0 EM
 2021-08-25 MET C:687 NA:NA DO NA DO DO DO NA NA NA
MET H:687 NA:NA DO NA DO DO DO NA NA NA
6toq 2 Q13362 100.0 0.0 X-RAY
 2020-10-21 MET B:360 AAA:370 119.0 0.643 S -157.6 116.8 119.0 0.643 0.0
2jak 1 Q13362 98.41 0.0 X-RAY
 2006-12-04 MET A:382 A:370 53.0 0.286 S -75.6 124.7 53.0 0.286 0.0 HOH
 3.836
 CG
 O
5jja 1 Q13362 100.0 0.0 X-RAY
 2016-07-13 MET A:342 A:370 18.0 0.097 H -75.6 -25.9 18.0 0.097 0.0 HOH
 2.737
 O
 O
MET B:342 B:370 17.0 0.092 H -75.5 -31.0 NA NA NA
5k6s 1 Q13362 100.0 0.0 X-RAY
 2016-12-07 MET A:345 A:370 19.0 0.103 H -68.3 -47.1 19.0 0.103 0.0 HOH
 4.298
 O
 O
5sw9 1 Q13362 100.0 0.0 X-RAY
 2016-11-30 MET A:345 A:370 22.0 0.119 H -73.3 -38.5 22.0 0.119 0.0 HOH
 4.788
 O
 O
5swf 1 Q13362 100.0 0.0 X-RAY
 2016-11-30 MET A:345 A:370 20.0 0.108 H -71.8 -39.2 20.0 0.108 0.0 HOH
 7.575
 N
 O
6oyl 1 Q13362 100.0 0.0 X-RAY
 2020-03-25 MET A:345 A:370 18.0 0.097 H -70.4 -41.5 18.0 0.097 0.0 HOH
 4.200
 O
 O
6vro 1 Q13362 100.0 0.0 X-RAY
 2020-03-25 MET A:345 A:370 24.0 0.13 H -73.1 -27.4 24.0 0.13 0.0
6voy 2 Q13362 100.0 0.0 EM
 2020-07-01 MET E:341 E:370 38.0 0.205 S -65.0 119.0 38.0 0.205 0.0
MET F:341 F:370 39.0 0.211 S -65.0 119.0 39.0 0.211 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q13362-f1 1 Q13362 100.0 0.0 MET A:370 A:370 0.0 0.0 H -80.9 -31.3
af-q14738-f1 1 Q14738 81.45 0.0 MET A:446 A:446 0.0 0.0 H -81.3 -32.4