Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr14 | 20823033 | . | C | A | CCDS41910.1:NM_005484.3:c.868Cgg>Agg_NP_005475.2:p.290R>R | Homo sapiens poly(ADP-ribose) polymerase 2 (PARP2), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
6x0l | 2 | Q9UGN5 | 97.71 | 0.0 |
EM |
2020-09-16 | ARG | B:297 | P:277 | 179.0 | 0.796 | H | -53.4 | -21.3 | 179.0 | 0.796 | 0.0 | ||||||
ARG | C:297 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
6x0m | 2 | Q9UGN5 | 97.71 | 0.0 |
EM |
2020-09-16 | ARG | B:297 | P:277 | 179.0 | 0.796 | H | -59.5 | -20.1 | 179.0 | 0.796 | 0.0 | ||||||
ARG | D:297 | p:277 | 187.0 | 0.831 | H | -62.2 | -21.4 | 187.0 | 0.831 | 0.0 | |||||||||||||
6x0n | 8 | Q9UGN5 | 97.71 | 0.0 |
EM |
2020-09-16 | ARG | V:297 | P:277 | 179.0 | 0.796 | H | -53.4 | -21.3 | 179.0 | 0.796 | 0.0 | ||||||
ARG | W:297 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
6usj | 7 | Q9UGN5 | 97.36 | 0.0 |
EM |
2020-10-14 | ARG | U:297 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
ARG | V:297 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
7aeo | 1 | Q9UGN5 | 100.0 | 0.0 |
X-RAY |
2021-05-19 | ARG | A:203 | A:290 | 142.0 | 0.631 | H | -67.8 | -15.0 | 142.0 | 0.631 | 0.0 | ||||||
4zzx | 1 | Q9UGN5 | 100.0 | 0.0 |
X-RAY |
2015-08-12 | ARG | A:70 | A:290 | 139.0 | 0.618 | H | -69.5 | -15.6 | 139.0 | 0.618 | 0.0 |
HOH |
4.030 |
CB |
O |
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ARG | B:70 | B:290 | 161.0 | 0.716 | H | -69.5 | -17.4 | NA | NA | NA | |||||||||||||
4zzy | 1 | Q9UGN5 | 100.0 | 0.0 |
X-RAY |
2015-08-12 | ARG | A:70 | A:290 | 132.0 | 0.587 | H | -55.2 | -22.9 | 132.0 | 0.587 | 0.0 |
D7N HOH |
9.895 3.818 |
CD CB |
F26 O |
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3kcz | 1 | Q9UGN5 | 99.42 | 0.0 |
X-RAY |
2009-11-10 | ARG | A:79 | A:290 | 154.0 | 0.684 | H | -58.0 | -37.7 | 154.0 | 0.684 | 0.0 |
HOH |
2.924 |
NE |
O |
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ARG | B:79 | B:290 | 158.0 | 0.702 | H | -63.5 | -36.9 | NA | NA | NA | |||||||||||||
3kjd | 1 | Q9UGN5 | 99.42 | 0.0 |
X-RAY |
2009-11-17 | ARG | A:79 | A:290 | 142.0 | 0.631 | H | -65.1 | -35.1 | 142.0 | 0.631 | 0.0 |
HOH |
3.147 |
NH2 |
O |
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ARG | B:79 | B:290 | 146.0 | 0.649 | H | -55.3 | -36.9 | NA | NA | NA | |||||||||||||
4pjv | 1 | Q9UGN5 | 99.42 | 0.0 |
X-RAY |
2014-09-24 | ARG | A:79 | A:290 | 94.0 | NA | H | -66.4 | -26.4 | 94.0 | NA | NA | ||||||
ARG | B:79 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
4tvj | 1 | Q9UGN5 | 99.42 | 0.0 |
X-RAY |
2015-07-08 | ARG | A:79 | A:290 | 145.0 | 0.644 | H | -61.2 | -41.1 | 145.0 | 0.644 | 0.0 |
HOH |
2.674 |
NE |
O |
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ARG | B:79 | B:290 | 147.0 | 0.653 | H | -57.2 | -50.3 | NA | NA | NA | |||||||||||||
1gs0 | 1 | O88554 | 90.31 | 0.0 |
X-RAY |
2002-12-19 | ARG | A:60 | A:266 | 133.0 | 0.591 | H | -59.3 | -49.5 | 133.0 | 0.591 | 0.0 |
HOH |
9.168 |
NH2 |
O |
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ARG | B:60 | B:266 | 128.0 | 0.569 | H | -60.0 | -48.2 | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-q9ugn5-f1 | 1 | Q9UGN5 | 100.0 | 0.0 | ARG | A:290 | A:290 | 157.0 | 0.698 | H | -62.1 | -33.3 |