Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr14 | 20824511 | . | G | A | CCDS41910.1:NM_005484.3:c.1186Gac>Aac_NP_005475.2:p.396D>N | Homo sapiens poly(ADP-ribose) polymerase 2 (PARP2), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
6x0l | 2 | Q9UGN5 | 97.71 | 0.0 |
EM |
2020-09-16 | ASP | B:403 | P:383 | 83.0 | 0.553 | T | -67.2 | -11.0 | 18.0 | 0.12 | 0.433 |
A:Q9NWY4:0.433 |
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ASP | C:403 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
6x0m | 2 | Q9UGN5 | 97.71 | 0.0 |
EM |
2020-09-16 | ASP | B:403 | P:383 | 73.0 | 0.487 | T | -69.6 | -12.1 | 7.0 | 0.047 | 0.44 |
A:Q9NWY4:0.44 |
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ASP | D:403 | p:383 | 81.0 | 0.54 | T | -68.2 | -9.4 | 9.0 | 0.06 | 0.48 |
C:Q9NWY4:0.48 |
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6x0n | 8 | Q9UGN5 | 97.71 | 0.0 |
EM |
2020-09-16 | ASP | V:403 | P:383 | 83.0 | 0.553 | T | -67.1 | -11.0 | 6.0 | 0.04 | 0.513 |
U:Q9NWY4:0.513 |
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ASP | W:403 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
6usj | 7 | Q9UGN5 | 97.36 | 0.0 |
EM |
2020-10-14 | ASP | U:403 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
ASP | V:403 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
7aeo | 1 | Q9UGN5 | 100.0 | 0.0 |
X-RAY |
2021-05-19 | ASP | A:309 | A:396 | 87.0 | 0.58 | T | -89.4 | 4.1 | 87.0 | 0.58 | 0.0 | ||||||
4zzx | 1 | Q9UGN5 | 100.0 | 0.0 |
X-RAY |
2015-08-12 | ASP | A:176 | A:396 | 74.0 | 0.493 | T | -76.6 | -10.1 | 74.0 | 0.493 | 0.0 |
HOH |
3.543 |
O |
O |
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ASP | B:176 | B:396 | 77.0 | 0.513 | T | -71.8 | -7.1 | NA | NA | NA | |||||||||||||
4zzy | 1 | Q9UGN5 | 100.0 | 0.0 |
X-RAY |
2015-08-12 | ASP | A:176 | A:396 | 85.0 | 0.567 | T | -67.8 | -13.1 | 85.0 | 0.567 | 0.0 |
HOH |
7.289 |
OD1 |
O |
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3kcz | 1 | Q9UGN5 | 99.42 | 0.0 |
X-RAY |
2009-11-10 | ASP | A:185 | A:396 | 94.0 | 0.627 | T | -74.2 | -7.6 | 94.0 | 0.627 | 0.0 |
GOL HOH |
2.864 2.645 |
OD2 O |
O1 O |
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ASP | B:185 | B:396 | 97.0 | 0.647 | T | -76.2 | -4.6 | NA | NA | NA | |||||||||||||
3kjd | 1 | Q9UGN5 | 99.42 | 0.0 |
X-RAY |
2009-11-17 | ASP | A:185 | A:396 | 98.0 | 0.653 | T | -81.9 | -6.0 | 98.0 | 0.653 | 0.0 |
GOL HOH |
2.702 2.589 |
OD2 O |
O3 O |
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ASP | B:185 | B:396 | 100.0 | 0.667 | T | -72.7 | -8.7 | NA | NA | NA | |||||||||||||
4pjv | 1 | Q9UGN5 | 99.42 | 0.0 |
X-RAY |
2014-09-24 | ASP | A:185 | A:396 | 93.0 | 0.62 | T | -76.2 | -15.5 | 93.0 | 0.62 | 0.0 |
GOL HOH |
3.061 2.705 |
OD2 OD1 |
O1 O |
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ASP | B:185 | B:396 | 98.0 | 0.653 | T | -77.5 | -5.5 | NA | NA | NA | |||||||||||||
4tvj | 1 | Q9UGN5 | 99.42 | 0.0 |
X-RAY |
2015-07-08 | ASP | A:185 | A:396 | 98.0 | 0.653 | T | -70.6 | -16.9 | 98.0 | 0.653 | 0.0 |
GOL HOH |
2.630 2.638 |
OD2 O |
O3 O |
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ASP | B:185 | B:396 | 100.0 | 0.667 | T | -76.2 | -8.8 | NA | NA | NA | |||||||||||||
1gs0 | 1 | O88554 | 90.31 | 0.0 |
X-RAY |
2002-12-19 | ASP | A:166 | A:372 | 95.0 | 0.633 | S | -66.8 | 4.1 | 95.0 | 0.633 | 0.0 |
HOH |
7.413 |
OD2 |
O |
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ASP | B:166 | B:372 | 99.0 | 0.66 | S | -67.3 | 3.5 | NA | NA | NA | |||||||||||||
5dsy | 1 | Q9UGN5 | 100.0 | 1e-176 |
X-RAY |
2016-07-27 | ASP | A:93 | A:383 | 96.0 | 0.64 | T | -75.5 | -1.8 | 96.0 | 0.64 | 0.0 |
HOH |
7.912 |
OD1 |
O |
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ASP | B:93 | B:383 | 91.0 | 0.607 | T | -75.3 | -2.7 | NA | NA | NA | |||||||||||||
ASP | C:93 | C:383 | 104.0 | 0.693 | T | -76.3 | -0.7 | NA | NA | NA | |||||||||||||
ASP | D:93 | D:383 | 98.0 | 0.653 | T | -80.8 | -1.1 | NA | NA | NA | |||||||||||||
6tx3 | 1 | Q9UGN5 | 100.0 | 1e-176 |
X-RAY |
2020-02-19 | ASP | A:93 | B:383 | 75.0 | 0.5 | T | -75.5 | -2.8 | 9.0 | 0.06 | 0.44 |
B:Q9NWY4:0.44 |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-q9ugn5-f1 | 1 | Q9UGN5 | 100.0 | 0.0 | ASP | A:396 | A:396 | 70.0 | 0.467 | T | -75.4 | -11.7 |