Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr14 | 21161973 | . | A | C | CCDS9554.1:NM_001097577.2:c.250Aag>Cag_NP_001091046.1:p.84K>Q | Homo sapiens angiogenin (ANG), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
4aoh | 1 | P03950 | 100.0 | 2e-92 |
X-RAY |
2012-10-10 | LYS | A:61 | A:60 | 159.0 | 0.795 | T | -51.7 | -44.5 | 159.0 | 0.795 | 0.0 |
HOH |
3.071 |
N |
O |
||
1a4y | 2 | P03950 | 100.0 | 9e-92 |
X-RAY |
1998-10-14 | LYS | B:60 | B:60 | 143.0 | 0.715 | S | -94.4 | -36.7 | 143.0 | 0.715 | 0.0 |
HOH |
9.569 |
O |
O |
||
LYS | D:60 | E:60 | 165.0 | 0.825 | S | -121.8 | -56.1 | 165.0 | 0.825 | 0.0 | |||||||||||||
1ang | 1 | P03950 | 100.0 | 9e-92 |
X-RAY |
1995-04-20 | LYS | A:60 | A:60 | 164.0 | 0.82 | T | -68.3 | -51.1 | 164.0 | 0.82 | 0.0 | ||||||
2ang | 1 | P03950 | 100.0 | 9e-92 |
X-RAY |
1999-04-02 | LYS | A:60 | A:60 | 158.0 | 0.79 | T | -52.1 | -47.3 | 158.0 | 0.79 | 0.0 |
HOH |
9.828 |
O |
O |
||
5m9s | 1 | P03950 | 99.19 | 1e-91 |
X-RAY |
2017-02-22 | LYS | A:61 | A:60 | 162.0 | 0.81 | T | -50.1 | -53.3 | 162.0 | 0.81 | 0.0 |
HOH |
2.910 |
N |
O |
||
4ahm | 1 | P03950 | 99.19 | 1e-91 |
X-RAY |
2012-10-10 | LYS | A:60 | A:60 | 158.0 | 0.79 | G | -47.5 | -45.3 | 158.0 | 0.79 | 0.0 |
HOH |
2.780 |
N |
O |
||
5m9c | 1 | P03950 | 99.19 | 2e-91 |
X-RAY |
2017-02-22 | LYS | A:61 | A:60 | 156.0 | 0.78 | T | -46.5 | -43.0 | 156.0 | 0.78 | 0.0 |
HOH |
3.038 |
N |
O |
||
5m9g | 1 | P03950 | 99.19 | 2e-91 |
X-RAY |
2017-02-22 | LYS | A:61 | A:60 | 157.0 | 0.785 | G | -40.4 | -32.4 | 157.0 | 0.785 | 0.0 |
HOH |
8.085 |
O |
O |
||
4ahh | 1 | P03950 | 99.19 | 2e-91 |
X-RAY |
2012-10-10 | LYS | A:60 | A:60 | 157.0 | 0.785 | S | -48.6 | -54.5 | 157.0 | 0.785 | 0.0 |
HOH |
8.042 |
O |
O |
||
5m9j | 1 | P03950 | 99.19 | 2e-91 |
X-RAY |
2017-02-22 | GLU | A:61 | A:60 | 138.0 | 0.726 | G | -44.5 | -43.2 | 138.0 | 0.726 | 0.0 |
HOH |
2.863 |
N |
O |
||
5m9p | 1 | P03950 | 99.19 | 3e-91 |
X-RAY |
2017-02-22 | LYS | A:61 | A:60 | 148.0 | 0.74 | T | -43.8 | -44.6 | 148.0 | 0.74 | 0.0 |
SO4 HOH |
9.519 2.777 |
CE N |
O3 O |
||
1b1i | 1 | P03950 | 99.19 | 3e-91 |
X-RAY |
1999-04-02 | LYS | A:60 | A:60 | 166.0 | 0.83 | T | -56.4 | -24.7 | 166.0 | 0.83 | 0.0 |
HOH |
6.055 |
N |
O |
||
1h0d | 3 | P03950 | 99.19 | 3e-91 |
X-RAY |
2003-06-19 | LYS | C:60 | C:60 | 140.0 | 0.7 | S | -56.6 | -53.8 | 140.0 | 0.7 | 0.0 |
SO4 SO4 HOH |
7.411 3.125 3.919 |
NZ CE O |
O1 O2 O |
||
1h52 | 1 | P03950 | 99.19 | 3e-91 |
X-RAY |
2001-08-09 | LYS | A:60 | A:60 | 149.0 | 0.745 | G | -64.2 | 2.7 | 149.0 | 0.745 | 0.0 |
HOH |
3.242 |
CD |
O |
||
1hby | 1 | P03950 | 99.19 | 3e-91 |
X-RAY |
2001-08-09 | LYS | A:60 | A:60 | 163.0 | 0.815 | T | -64.5 | -35.1 | 163.0 | 0.815 | 0.0 |
HOH |
7.239 |
N |
O |
||
1b1e | 1 | P03950 | 99.19 | 3e-91 |
X-RAY |
1999-04-02 | LYS | A:60 | A:60 | 168.0 | 0.84 | T | -53.5 | -54.3 | 168.0 | 0.84 | 0.0 | ||||||
5m9q | 1 | P03950 | 99.19 | 3e-91 |
X-RAY |
2017-02-22 | LYS | A:61 | A:60 | 161.0 | 0.805 | T | -44.9 | -48.1 | 161.0 | 0.805 | 0.0 |
SO4 HOH |
9.595 2.673 |
NZ O |
O2 O |
||
4ahf | 1 | P03950 | 99.19 | 3e-91 |
X-RAY |
2012-10-10 | LYS | A:60 | A:60 | 166.0 | 0.83 | G | -43.8 | -42.7 | 166.0 | 0.83 | 0.0 |
SO4 HOH |
9.753 2.416 |
NZ O |
O2 O |
||
4ahk | 1 | P03950 | 99.19 | 3e-91 |
X-RAY |
2012-10-10 | LYS | A:60 | A:60 | 142.0 | 0.71 | T | -48.1 | -38.5 | 142.0 | 0.71 | 0.0 |
HOH |
7.243 |
O |
O |
||
LYS | B:60 | B:60 | 137.0 | 0.685 | T | -50.7 | -45.0 | NA | NA | NA | |||||||||||||
4ahg | 1 | P03950 | 99.19 | 4e-91 |
X-RAY |
2012-10-10 | LYS | A:60 | A:60 | 166.0 | 0.83 | T | -62.1 | -18.6 | 166.0 | 0.83 | 0.0 |
HOH |
5.682 |
N |
O |
||
4ahj | 1 | P03950 | 98.37 | 5e-91 |
X-RAY |
2012-10-10 | LYS | A:60 | A:60 | 164.0 | 0.82 | T | -54.6 | -32.4 | 164.0 | 0.82 | 0.0 |
HOH |
3.134 |
N |
O |
||
5m9r | 1 | P03950 | 99.19 | 7e-91 |
X-RAY |
2017-02-22 | LYS | A:61 | A:60 | 151.0 | 0.755 | T | -56.9 | -44.8 | 151.0 | 0.755 | 0.0 |
HOH |
3.883 |
O |
O |
||
LYS | B:61 | B:60 | 175.0 | 0.875 | T | -45.7 | -49.1 | NA | NA | NA | |||||||||||||
4ahn | 1 | P03950 | 99.19 | 8e-91 |
X-RAY |
2012-10-10 | LYS | A:60 | A:60 | 149.0 | 0.745 | T | -72.7 | -45.2 | 149.0 | 0.745 | 0.0 | ||||||
1un4 | 1 | P03950 | 98.37 | 1e-90 |
X-RAY |
2004-02-06 | LYS | A:60 | A:60 | 73.0 | NA | T | -53.4 | -48.7 | 73.0 | NA | NA |
HOH |
3.219 |
N |
O |
||
5m9a | 1 | P03950 | 99.19 | 1e-90 |
X-RAY |
2017-02-22 | LYS | A:61 | A:60 | 164.0 | 0.82 | T | -77.8 | -8.4 | 164.0 | 0.82 | 0.0 |
HOH |
6.587 |
CD |
O |
||
5m9t | 1 | P03950 | 99.19 | 1e-90 |
X-RAY |
2017-02-22 | LYS | A:61 | A:60 | 152.0 | 0.76 | T | -51.3 | -48.4 | 152.0 | 0.76 | 0.0 |
GOL BO4 HOH |
9.925 5.733 5.211 |
NZ O N |
O1 O2 O |
||
LYS | B:61 | B:60 | 159.0 | 0.795 | S | -35.8 | -55.1 | NA | NA | NA | |||||||||||||
1b1j | 1 | P03950 | 99.19 | 1e-90 |
X-RAY |
1999-04-02 | LYS | A:60 | A:60 | 147.0 | 0.735 | T | -160.0 | -37.9 | 147.0 | 0.735 | 0.0 |
HOH |
4.734 |
N |
O |
||
4ahd | 1 | P03950 | 99.19 | 2e-90 |
X-RAY |
2012-10-10 | LYS | A:60 | A:60 | 148.0 | 0.74 | T | -49.9 | -63.1 | 148.0 | 0.74 | 0.0 |
HOH |
7.209 |
N |
O |
||
LYS | B:60 | B:60 | 138.0 | 0.69 | T | -35.8 | -67.6 | NA | NA | NA | |||||||||||||
4ahi | 1 | P03950 | 99.19 | 2e-90 |
X-RAY |
2012-10-10 | LYS | A:60 | A:60 | 149.0 | 0.745 | S | -96.5 | 124.3 | 149.0 | 0.745 | 0.0 | ||||||
4ahe | 1 | P03950 | 99.19 | 2e-90 |
X-RAY |
2012-10-10 | LYS | A:60 | A:60 | 115.0 | 0.575 | T | -52.4 | -32.5 | 115.0 | 0.575 | 0.0 |
HOH |
7.550 |
O |
O |
||
5m9m | 1 | P03950 | 99.19 | 2e-90 |
X-RAY |
2017-02-22 | LYS | A:61 | A:60 | 157.0 | 0.785 | T | -46.0 | -45.9 | 157.0 | 0.785 | 0.0 |
HOH |
5.289 |
N |
O |
||
LYS | B:61 | B:60 | 164.0 | 0.82 | T | -41.2 | -56.3 | NA | NA | NA | |||||||||||||
LYS | C:61 | C:60 | 177.0 | 0.885 | S | -99.3 | -24.0 | NA | NA | NA | |||||||||||||
LYS | D:61 | D:60 | 152.0 | 0.76 | S | 64.8 | 103.9 | NA | NA | NA | |||||||||||||
4ahl | 1 | P03950 | 99.19 | 2e-90 |
X-RAY |
2012-10-10 | LYS | A:60 | A:60 | 140.0 | 0.7 | T | -102.1 | -64.7 | 140.0 | 0.7 | 0.0 |
HOH |
6.713 |
O |
O |
||
1un3 | 1 | P03950 | 98.37 | 2e-90 |
X-RAY |
2004-02-06 | LYS | A:60 | A:60 | 100.0 | NA | T | -50.5 | -45.2 | 100.0 | NA | NA |
HOH |
6.553 |
CG |
O |
||
5m9v | 1 | P03950 | 99.19 | 3e-90 |
X-RAY |
2017-02-22 | LYS | A:61 | A:60 | 161.0 | 0.805 | T | -45.8 | -47.5 | 161.0 | 0.805 | 0.0 |
HOH |
2.969 |
N |
O |
||
5eqo | 1 | P03950 | 100.0 | 3e-90 |
X-RAY |
2016-08-17 | LYS | A:60 | A:60 | 163.0 | 0.815 | T | -37.4 | -56.9 | 163.0 | 0.815 | 0.0 |
HOH |
3.157 |
N |
O |
||
1k58 | 1 | P03950 | 98.37 | 4e-90 |
X-RAY |
2002-03-20 | LYS | A:60 | A:60 | 175.0 | 0.875 | T | -51.1 | -30.3 | 175.0 | 0.875 | 0.0 |
HOH |
3.521 |
CB |
O |
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5eop | 1 | P03950 | 100.0 | 4e-90 |
X-RAY |
2016-08-17 | LYS | A:59 | A:60 | 157.0 | 0.785 | T | -52.7 | -40.0 | 157.0 | 0.785 | 0.0 |
HOH |
3.097 |
N |
O |
||
1h53 | 1 | P03950 | 98.37 | 5e-90 |
X-RAY |
2001-08-09 | LYS | A:60 | A:60 | 168.0 | 0.84 | T | -65.7 | -37.0 | 168.0 | 0.84 | 0.0 | ||||||
1k59 | 1 | P03950 | 98.37 | 5e-90 |
X-RAY |
2002-03-20 | LYS | A:60 | A:60 | 174.0 | 0.87 | T | -65.7 | -39.9 | 174.0 | 0.87 | 0.0 |
HOH |
3.545 |
O |
O |
||
1k5a | 1 | P03950 | 98.37 | 5e-90 |
X-RAY |
2002-03-20 | LYS | A:60 | A:60 | 163.0 | 0.815 | T | -49.1 | -40.1 | 163.0 | 0.815 | 0.0 |
HOH |
3.736 |
CE |
O |
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5epz | 1 | P03950 | 100.0 | 2e-89 |
X-RAY |
2016-08-17 | LYS | A:59 | A:60 | 169.0 | 0.845 | T | -46.4 | -48.6 | 169.0 | 0.845 | 0.0 |
SO4 HOH |
9.140 2.913 |
NZ N |
O4 O |
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1k5b | 1 | P03950 | 99.17 | 5e-89 |
X-RAY |
2002-03-20 | LYS | A:60 | A:60 | 165.0 | 0.825 | T | -43.4 | -45.4 | 165.0 | 0.825 | 0.0 |
HOH |
6.263 |
N |
O |
||
7pnr | 1 | P03950 | 97.52 | 8e-89 |
X-RAY |
2021-09-29 | LYS | A:60 | A:60 | 150.0 | 0.75 | T | -44.1 | -50.5 | 150.0 | 0.75 | 0.0 |
HOH |
3.618 |
O |
O |
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7pnj | 1 | P03950 | 96.69 | 2e-88 |
X-RAY |
2021-09-29 | LYS | A:60 | A:60 | 159.0 | 0.795 | S | -62.3 | -45.0 | 159.0 | 0.795 | 0.0 |
HOH |
4.860 |
O |
O |
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1un5 | 1 | P03950,P00656 | 97.58 | 2e-87 |
X-RAY |
2004-02-06 | LYS | A:62 | A:61 | 67.0 | NA | T | -63.5 | -45.7 | 67.0 | NA | NA | ||||||
4b36 | 1 | P03950,Q12762 | 93.6 | 1e-82 |
X-RAY |
2012-12-26 | LYS | A:61 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
LYS | B:61 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
1gv7 | 1 | P03950,P00656 | 89.43 | 4e-78 |
X-RAY |
2002-08-22 | LYS | A:60 | A:60 | 146.0 | 0.73 | -61.0 | 116.6 | 146.0 | 0.73 | 0.0 |
HOH |
3.834 |
CE |
O |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p03950-f1 | 1 | P03950 | 100.0 | 3e-110 | LYS | A:84 | A:84 | 147.0 | 0.735 | T | -60.0 | -45.1 |