Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr14 | 21162132 | . | G | A | CCDS9554.1:NM_001097577.2:c.409Gtc>Atc_NP_001091046.1:p.137V>I | Homo sapiens angiogenin (ANG), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
4aoh | 1 | P03950 | 100.0 | 2e-92 |
X-RAY |
2012-10-10 | VAL | A:114 | A:113 | 32.0 | 0.206 | E | -127.5 | 1.4 | 32.0 | 0.206 | 0.0 |
HOH |
2.795 |
O |
O |
||
1a4y | 2 | P03950 | 100.0 | 9e-92 |
X-RAY |
1998-10-14 | VAL | B:113 | B:113 | 19.0 | 0.123 | E | -128.5 | -6.9 | 16.0 | 0.103 | 0.02 |
A:P13489:0.019 |
HOH |
2.898 |
O |
O |
|
VAL | D:113 | E:113 | 19.0 | 0.123 | E | -120.0 | -0.1 | 16.0 | 0.103 | 0.02 |
C:P13489:0.019 |
HOH |
2.666 |
O |
O |
||||||||
1ang | 1 | P03950 | 100.0 | 9e-92 |
X-RAY |
1995-04-20 | VAL | A:113 | A:113 | 30.0 | 0.194 | E | -131.2 | 8.8 | 30.0 | 0.194 | 0.0 | ||||||
2ang | 1 | P03950 | 100.0 | 9e-92 |
X-RAY |
1999-04-02 | VAL | A:113 | A:113 | 26.0 | 0.168 | E | -143.7 | 1.2 | 26.0 | 0.168 | 0.0 |
HOH |
2.598 |
O |
O |
||
5m9s | 1 | P03950 | 99.19 | 1e-91 |
X-RAY |
2017-02-22 | VAL | A:114 | A:113 | 30.0 | 0.194 | E | -128.3 | -4.0 | 30.0 | 0.194 | 0.0 |
HOH |
2.707 |
O |
O |
||
4ahm | 1 | P03950 | 99.19 | 1e-91 |
X-RAY |
2012-10-10 | ILE | A:113 | A:113 | 47.0 | 0.269 | E | -131.8 | 2.9 | 47.0 | 0.269 | 0.0 |
HOH |
2.813 |
O |
O |
||
5m9c | 1 | P03950 | 99.19 | 2e-91 |
X-RAY |
2017-02-22 | VAL | A:114 | A:113 | 32.0 | 0.206 | E | -126.5 | -5.0 | 32.0 | 0.206 | 0.0 |
HOH |
2.621 |
O |
O |
||
5m9g | 1 | P03950 | 99.19 | 2e-91 |
X-RAY |
2017-02-22 | VAL | A:114 | A:113 | 34.0 | 0.219 | E | -128.9 | 9.2 | 34.0 | 0.219 | 0.0 |
PEG HOH |
4.869 2.541 |
O O |
C3 O |
||
4ahh | 1 | P03950 | 99.19 | 2e-91 |
X-RAY |
2012-10-10 | VAL | A:113 | A:113 | 28.0 | 0.181 | E | -129.9 | 1.2 | 28.0 | 0.181 | 0.0 |
HOH |
2.907 |
O |
O |
||
5m9j | 1 | P03950 | 99.19 | 2e-91 |
X-RAY |
2017-02-22 | VAL | A:114 | A:113 | 37.0 | 0.239 | E | -127.9 | -2.6 | 37.0 | 0.239 | 0.0 |
HOH |
2.633 |
O |
O |
||
5m9p | 1 | P03950 | 99.19 | 3e-91 |
X-RAY |
2017-02-22 | VAL | A:114 | A:113 | 29.0 | 0.187 | E | -131.3 | 0.1 | 29.0 | 0.187 | 0.0 |
SO4 HOH |
8.760 2.770 |
O O |
O2 O |
||
1b1i | 1 | P03950 | 99.19 | 3e-91 |
X-RAY |
1999-04-02 | VAL | A:113 | A:113 | 34.0 | 0.219 | E | -139.9 | 2.0 | 34.0 | 0.219 | 0.0 |
HOH |
2.983 |
O |
O |
||
1h0d | 3 | P03950 | 99.19 | 3e-91 |
X-RAY |
2003-06-19 | VAL | C:113 | C:113 | 19.0 | 0.123 | E | -118.9 | 2.2 | 19.0 | 0.123 | 0.0 |
SO4 HOH |
7.413 2.590 |
O O |
O1 O |
||
1h52 | 1 | P03950 | 99.19 | 3e-91 |
X-RAY |
2001-08-09 | VAL | A:113 | A:113 | 31.0 | 0.2 | E | -129.0 | 10.6 | 31.0 | 0.2 | 0.0 |
POP HOH |
4.218 3.048 |
O O |
O1 O |
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1hby | 1 | P03950 | 99.19 | 3e-91 |
X-RAY |
2001-08-09 | VAL | A:113 | A:113 | 30.0 | 0.194 | E | -127.7 | -3.8 | 30.0 | 0.194 | 0.0 |
PO4 HOH |
4.621 2.451 |
O O |
O2 O |
||
1b1e | 1 | P03950 | 99.19 | 3e-91 |
X-RAY |
1999-04-02 | VAL | A:113 | A:113 | 28.0 | 0.181 | E | -138.0 | -0.7 | 28.0 | 0.181 | 0.0 |
HOH |
2.367 |
O |
O |
||
5m9q | 1 | P03950 | 99.19 | 3e-91 |
X-RAY |
2017-02-22 | VAL | A:114 | A:113 | 27.0 | 0.174 | E | -126.6 | -1.8 | 27.0 | 0.174 | 0.0 |
SO4 SO4 PEG PEG PGE HOH |
9.020 7.253 9.814 5.986 6.951 2.753 |
O CG1 CG2 O O O |
O1 O4 O1 C4 O1 O |
||
4ahf | 1 | P03950 | 99.19 | 3e-91 |
X-RAY |
2012-10-10 | VAL | A:113 | A:113 | 25.0 | 0.161 | E | -126.7 | 10.2 | 25.0 | 0.161 | 0.0 |
SO4 EDO HOH |
8.902 8.312 2.920 |
O CG1 O |
O3 O1 O |
||
4ahk | 1 | P03950 | 99.19 | 3e-91 |
X-RAY |
2012-10-10 | VAL | A:113 | A:113 | 33.0 | 0.213 | E | -141.9 | -3.0 | 33.0 | 0.213 | 0.0 |
HOH |
2.757 |
O |
O |
||
VAL | B:113 | B:113 | 38.0 | 0.245 | E | -132.7 | -7.0 | NA | NA | NA | |||||||||||||
4ahg | 1 | P03950 | 99.19 | 4e-91 |
X-RAY |
2012-10-10 | VAL | A:113 | A:113 | 29.0 | 0.187 | E | -140.4 | 4.0 | 29.0 | 0.187 | 0.0 | ||||||
4ahj | 1 | P03950 | 98.37 | 5e-91 |
X-RAY |
2012-10-10 | VAL | A:113 | A:113 | 37.0 | 0.239 | E | -129.7 | 1.3 | 37.0 | 0.239 | 0.0 |
HOH |
2.612 |
O |
O |
||
5m9r | 1 | P03950 | 99.19 | 7e-91 |
X-RAY |
2017-02-22 | VAL | A:114 | A:113 | 15.0 | 0.097 | E | -118.0 | -15.9 | 15.0 | 0.097 | 0.0 |
TAR TLA PEG HOH |
6.024 4.444 9.400 2.777 |
O O O O |
O1 O1 O4 O |
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VAL | B:114 | B:113 | 14.0 | 0.09 | E | -116.4 | -18.5 | NA | NA | NA | |||||||||||||
4ahn | 1 | P03950 | 99.19 | 8e-91 |
X-RAY |
2012-10-10 | VAL | A:113 | A:113 | 30.0 | 0.194 | E | -153.2 | 9.1 | 30.0 | 0.194 | 0.0 | ||||||
1un4 | 1 | P03950 | 98.37 | 1e-90 |
X-RAY |
2004-02-06 | VAL | A:113 | A:113 | 37.0 | 0.239 | E | -128.1 | -4.8 | 37.0 | 0.239 | 0.0 |
HOH |
2.801 |
O |
O |
||
5m9a | 1 | P03950 | 99.19 | 1e-90 |
X-RAY |
2017-02-22 | VAL | A:114 | A:113 | 35.0 | 0.226 | E | -133.2 | -7.7 | 35.0 | 0.226 | 0.0 |
HOH |
2.672 |
O |
O |
||
5m9t | 1 | P03950 | 99.19 | 1e-90 |
X-RAY |
2017-02-22 | VAL | A:114 | A:113 | 17.0 | 0.11 | E | -124.3 | -14.1 | 17.0 | 0.11 | 0.0 |
HOH |
2.719 |
O |
O |
||
VAL | B:114 | B:113 | 22.0 | 0.142 | E | -127.3 | -10.0 | NA | NA | NA | |||||||||||||
1b1j | 1 | P03950 | 99.19 | 1e-90 |
X-RAY |
1999-04-02 | VAL | A:113 | A:113 | 25.0 | 0.161 | E | -123.5 | 2.6 | 25.0 | 0.161 | 0.0 |
HOH |
4.530 |
O |
O |
||
4ahd | 1 | P03950 | 99.19 | 2e-90 |
X-RAY |
2012-10-10 | VAL | A:113 | A:113 | 28.0 | 0.181 | E | -134.9 | 9.1 | 28.0 | 0.181 | 0.0 |
HOH |
5.076 |
O |
O |
||
VAL | B:113 | B:113 | 33.0 | 0.213 | E | -135.1 | 12.0 | NA | NA | NA | |||||||||||||
4ahi | 1 | P03950 | 99.19 | 2e-90 |
X-RAY |
2012-10-10 | VAL | A:113 | A:113 | 34.0 | 0.219 | E | -134.5 | 15.6 | 34.0 | 0.219 | 0.0 |
HOH |
5.223 |
O |
O |
||
4ahe | 1 | P03950 | 99.19 | 2e-90 |
X-RAY |
2012-10-10 | VAL | A:113 | A:113 | 36.0 | 0.232 | E | -134.0 | 5.8 | 36.0 | 0.232 | 0.0 |
HOH |
6.660 |
CG2 |
O |
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5m9m | 1 | P03950 | 99.19 | 2e-90 |
X-RAY |
2017-02-22 | VAL | A:114 | A:113 | 14.0 | 0.09 | E | -128.0 | -10.4 | 14.0 | 0.09 | 0.0 |
EDO HOH |
3.504 2.568 |
O O |
O2 O |
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VAL | B:114 | B:113 | 15.0 | 0.097 | E | -122.6 | -12.2 | NA | NA | NA | |||||||||||||
VAL | C:114 | C:113 | 15.0 | 0.097 | E | -127.8 | -9.9 | NA | NA | NA | |||||||||||||
VAL | D:114 | D:113 | 26.0 | 0.168 | E | -120.4 | -13.5 | NA | NA | NA | |||||||||||||
4ahl | 1 | P03950 | 99.19 | 2e-90 |
X-RAY |
2012-10-10 | VAL | A:113 | A:113 | 25.0 | 0.161 | E | -142.6 | -11.0 | 25.0 | 0.161 | 0.0 |
HOH |
2.442 |
O |
O |
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1un3 | 1 | P03950 | 98.37 | 2e-90 |
X-RAY |
2004-02-06 | VAL | A:113 | A:113 | 36.0 | 0.232 | E | -127.2 | -2.5 | 36.0 | 0.232 | 0.0 |
HOH |
2.749 |
O |
O |
||
5m9v | 1 | P03950 | 99.19 | 3e-90 |
X-RAY |
2017-02-22 | VAL | A:114 | A:113 | 33.0 | 0.213 | E | -127.4 | -0.9 | 33.0 | 0.213 | 0.0 |
HOH |
2.797 |
O |
O |
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5eqo | 1 | P03950 | 100.0 | 3e-90 |
X-RAY |
2016-08-17 | VAL | A:113 | A:113 | 24.0 | 0.155 | E | -127.9 | -1.5 | 24.0 | 0.155 | 0.0 |
SO4 HOH |
8.956 2.883 |
O O |
O2 O |
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1k58 | 1 | P03950 | 98.37 | 4e-90 |
X-RAY |
2002-03-20 | VAL | A:113 | A:113 | 13.0 | 0.084 | E | -124.6 | -22.5 | 13.0 | 0.084 | 0.0 |
HOH |
4.017 |
CG1 |
O |
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5eop | 1 | P03950 | 100.0 | 4e-90 |
X-RAY |
2016-08-17 | VAL | A:112 | A:113 | 35.0 | 0.226 | E | -128.5 | 0.8 | 35.0 | 0.226 | 0.0 |
HOH |
2.844 |
O |
O |
||
1h53 | 1 | P03950 | 98.37 | 5e-90 |
X-RAY |
2001-08-09 | VAL | A:113 | A:113 | 33.0 | 0.213 | E | -122.4 | -8.7 | 33.0 | 0.213 | 0.0 |
PO4 HOH |
4.533 2.860 |
O O |
O2 O |
||
1k59 | 1 | P03950 | 98.37 | 5e-90 |
X-RAY |
2002-03-20 | VAL | A:113 | A:113 | 36.0 | 0.232 | E | -128.6 | -2.0 | 36.0 | 0.232 | 0.0 |
HOH |
2.692 |
O |
O |
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1k5a | 1 | P03950 | 98.37 | 5e-90 |
X-RAY |
2002-03-20 | VAL | A:113 | A:113 | 32.0 | 0.206 | E | -123.0 | 2.9 | 32.0 | 0.206 | 0.0 |
HOH |
2.677 |
O |
O |
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5epz | 1 | P03950 | 100.0 | 2e-89 |
X-RAY |
2016-08-17 | VAL | A:112 | A:113 | 27.0 | 0.174 | E | -127.2 | -1.5 | 27.0 | 0.174 | 0.0 |
HOH |
2.720 |
O |
O |
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1k5b | 1 | P03950 | 99.17 | 5e-89 |
X-RAY |
2002-03-20 | VAL | A:113 | A:113 | 32.0 | 0.206 | E | -122.5 | -1.5 | 32.0 | 0.206 | 0.0 |
HOH |
2.542 |
O |
O |
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7pnr | 1 | P03950 | 97.52 | 8e-89 |
X-RAY |
2021-09-29 | VAL | A:113 | A:113 | 33.0 | 0.213 | E | -134.1 | -1.6 | 33.0 | 0.213 | 0.0 |
HOH |
2.752 |
O |
O |
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7pnj | 1 | P03950 | 96.69 | 2e-88 |
X-RAY |
2021-09-29 | VAL | A:113 | A:113 | 14.0 | 0.09 | E | -127.0 | -27.5 | 14.0 | 0.09 | 0.0 |
CIT |
3.451 |
O |
O5 |
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1un5 | 1 | P03950,P00656 | 97.58 | 2e-87 |
X-RAY |
2004-02-06 | VAL | A:115 | A:114 | 19.0 | 0.123 | E | -129.2 | -3.5 | 19.0 | 0.123 | 0.0 |
HOH |
4.665 |
O |
O |
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4b36 | 1 | P03950,Q12762 | 93.6 | 1e-82 |
X-RAY |
2012-12-26 | VAL | A:116 | A:115 | 19.0 | 0.123 | E | -128.2 | -9.8 | 19.0 | 0.123 | 0.0 |
HOH |
2.544 |
O |
O |
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VAL | B:116 | B:115 | 19.0 | 0.123 | E | -114.3 | -6.2 | NA | NA | NA | |||||||||||||
1gv7 | 1 | P03950,P00656 | 89.43 | 4e-78 |
X-RAY |
2002-08-22 | VAL | A:115 | A:115 | 7.0 | 0.045 | E | -127.3 | -18.0 | 7.0 | 0.045 | 0.0 |
CIT HOH |
4.343 2.598 |
O O |
O4 O |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p03950-f1 | 1 | P03950 | 100.0 | 3e-110 | VAL | A:137 | A:137 | 16.0 | 0.103 | E | -118.8 | -11.5 |