Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr14 21931891 . T A CCDS9570.1:NM_032846.3:c.398gAa>gTa_NP_116235.2:p.133E>V Homo sapiens RAB2B, member RAS oncogene family (RAB2B), transcript variant 1, mRNA.
pdb_id: 
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label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2a5j 1 Q8WUD1 99.42 8e-128 X-RAY
 2005-07-19 GLU A:148 A:138 47.0 0.247 H -71.6 -41.3 47.0 0.247 0.0 HOH
 2.589
 OE1
 O
4rke 1 O18333 91.86 2e-119 X-RAY
 2014-12-10 GLU A:137 A:133 62.0 0.326 H -70.2 -39.4 62.0 0.326 0.0 1PE
HOH
 8.207
2.540
 O
O
 C24
O
1z0a 1 P61019 94.64 7e-119 X-RAY
 2005-07-26 GLU A:137 A:133 61.0 0.321 H -69.6 -39.5 61.0 0.321 0.0 HOH
 2.595
 OE1
 O
GLU B:137 B:133 64.0 0.337 H -67.1 -45.4 NA NA NA
GLU C:137 C:133 54.0 0.284 H -66.7 -41.6 NA NA NA
GLU D:137 D:133 36.0 NA H -67.8 -32.4 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q8wud1-f1 1 Q8WUD1 100.0 3e-164 GLU A:133 A:133 61.0 0.321 H -71.6 -41.0
af-p61019-f1 1 P61019 89.8 4e-134 GLU A:133 A:133 63.0 0.332 H -71.1 -40.6