Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr14 21936535 . T A CCDS9570.1:NM_032846.3:c.343Atg>Ttg_NP_116235.2:p.115M>L Homo sapiens RAB2B, member RAS oncogene family (RAB2B), transcript variant 1, mRNA.
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2a5j 1 Q8WUD1 99.42 8e-128 X-RAY
 2005-07-19 MET A:130 A:120 0.0 0.0 E -111.9 127.0 0.0 0.0 0.0 HOH
 3.800
 CE
 O
4rke 1 O18333 91.86 2e-119 X-RAY
 2014-12-10 MET A:119 A:115 1.0 0.005 E -99.6 114.1 1.0 0.005 0.0 1PE
HOH
 7.188
4.584
 CE
CE
 C16
O
1z0a 1 P61019 94.64 7e-119 X-RAY
 2005-07-26 MET A:119 A:115 1.0 0.005 E -107.6 129.8 1.0 0.005 0.0 HOH
 3.383
 CE
 O
MET B:119 B:115 3.0 0.016 E -98.5 121.8 NA NA NA
MET C:119 C:115 1.0 0.005 E -99.1 112.5 NA NA NA
MET D:119 D:115 0.0 0.0 E -99.9 123.7 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q8wud1-f1 1 Q8WUD1 100.0 3e-164 MET A:115 A:115 0.0 0.0 E -105.1 115.7
af-p61019-f1 1 P61019 89.8 4e-134 MET A:115 A:115 0.0 0.0 E -104.1 116.4