Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr14 24738885 . T A CCDS45088.1:NM_004581.5:c.443tAt>tTt_NP_004572.3:p.148Y>F Homo sapiens Rab geranylgeranyltransferase alpha subunit (RABGGTA), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1dce 1 Q08602 91.36 0.0 X-RAY
 2000-03-24 TYR A:148 A:148 4.0 0.017 H -64.7 -35.9 4.0 0.017 0.0 HOH
 4.016
 N
 O
TYR C:148 C:148 5.0 0.022 H -51.9 -37.9 NA NA NA
1ltx 1 Q08602 91.36 0.0 X-RAY
 2003-05-21 TYR A:148 A:148 5.0 0.022 H -62.2 -42.0 5.0 0.022 0.0
4ehm 1 Q08602 81.82 1e-160 X-RAY
 2012-05-30 TYR A:148 A:148 10.0 0.043 H -62.0 -41.5 10.0 0.043 0.0 HOH
 3.673
 N
 O
4gts 1 Q08602 81.82 1e-160 X-RAY
 2012-10-24 TYR A:148 A:148 9.0 0.039 H -66.5 -37.2 7.0 0.03 0.009 B:Q08603:0.009
 HOH
 3.517
 N
 O
4gtt 1 Q08602 81.82 1e-160 X-RAY
 2012-10-24 TYR A:148 A:148 9.0 0.039 H -61.7 -39.2 9.0 0.039 0.0 HOH
 3.732
 N
 O
4gtv 1 Q08602 81.82 1e-160 X-RAY
 2012-10-24 TYR A:148 A:148 9.0 0.039 H -60.4 -42.5 8.0 0.035 0.004 B:Q08603:0.004
 HOH
 3.693
 N
 O
3dss 1 Q08602 81.82 1e-160 X-RAY
 2008-09-09 TYR A:149 A:148 9.0 0.039 H -62.6 -40.5 8.0 0.035 0.004 B:Q08603:0.004
 HOH
 3.634
 N
 O
3dst 1 Q08602 81.82 1e-160 X-RAY
 2008-09-09 TYR A:149 A:148 5.0 0.022 H -66.2 -40.2 3.0 0.013 0.009 B:Q08603:0.009
 HOH
 3.712
 N
 O
3dsu 1 Q08602 81.82 1e-160 X-RAY
 2008-09-09 TYR A:149 A:148 10.0 0.043 H -63.6 -42.5 8.0 0.035 0.008 B:Q08603:0.009
 HOH
 3.646
 N
 O
3dsv 1 Q08602 81.82 1e-160 X-RAY
 2008-09-09 TYR A:149 A:148 6.0 0.026 H -60.8 -40.8 4.0 0.017 0.009 B:Q08603:0.009
 HOH
 3.761
 N
 O
3dsw 1 Q08602 81.82 1e-160 X-RAY
 2008-09-09 TYR A:149 A:148 6.0 0.026 H -63.3 -40.9 4.0 0.017 0.009 B:Q08603:0.009
 HOH
 3.732
 N
 O
3dsx 1 Q08602 81.82 1e-160 X-RAY
 2008-09-09 TYR A:149 A:148 6.0 0.026 H -64.3 -39.1 6.0 0.026 0.0 HOH
 3.720
 N
 O
3hxb 1 Q08602 81.82 1e-160 X-RAY
 2009-09-08 TYR A:149 A:148 6.0 0.026 H -66.9 -39.3 6.0 0.026 0.0 HOH
 3.799
 N
 O
3hxc 1 Q08602 81.82 1e-160 X-RAY
 2009-09-08 TYR A:149 A:148 10.0 0.043 H -61.2 -40.6 10.0 0.043 0.0 HOH
 3.689
 N
 O
3hxd 1 Q08602 81.82 1e-160 X-RAY
 2009-09-08 TYR A:149 A:148 9.0 0.039 H -62.3 -40.5 9.0 0.039 0.0 HOH
 3.616
 N
 O
3hxe 1 Q08602 81.82 1e-160 X-RAY
 2009-09-08 TYR A:149 A:148 9.0 0.039 H -57.8 -41.0 9.0 0.039 0.0 HOH
 3.749
 N
 O
3hxf 1 Q08602 81.82 1e-160 X-RAY
 2009-09-08 TYR A:149 A:148 9.0 0.039 H -60.6 -41.7 9.0 0.039 0.0 HOH
 3.821
 N
 O
3c72 1 Q08602 81.82 1e-160 X-RAY
 2008-07-22 TYR A:152 A:148 6.0 0.026 H -62.8 -38.0 6.0 0.026 0.0 HOH
 3.865
 N
 O
3pz1 1 Q08602 81.82 1e-160 X-RAY
 2011-05-11 TYR A:150 A:148 9.0 0.039 H -62.9 -42.3 9.0 0.039 0.0 HOH
 3.877
 N
 O
3pz2 1 Q08602 81.82 1e-160 X-RAY
 2011-05-11 TYR A:150 A:148 7.0 0.03 H -61.7 -40.1 4.0 0.017 0.013 B:Q08603:0.013
 HOH
 3.926
 N
 O
3pz3 1 Q08602 81.82 1e-160 X-RAY
 2011-05-11 TYR A:150 A:148 9.0 0.039 H -60.3 -41.1 9.0 0.039 0.0 HOH
 3.713
 N
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q92696-f1 1 Q92696 100.0 0.0 TYR A:148 A:148 4.0 0.017 H -64.2 -40.7