Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr14 | 65494257 | . | A | C | CCDS9769.1:NM_002028.3:c.461tAt>tCt_NP_002019.1:p.154Y>S | Homo sapiens farnesyltransferase, CAAX box, beta (FNTB), mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
1jcq | 2 | P49356 | 100.0 | 0.0 |
X-RAY |
2001-11-02 | TYR | B:154 | B:154 | 2.0 | 0.009 | H | -61.7 | -48.2 | 2.0 | 0.009 | 0.0 |
FPP 739 HOH |
4.444 7.543 2.929 |
CE2 N OH |
C15 OEM O |
||
1ld7 | 2 | P49356 | 100.0 | 0.0 |
X-RAY |
2002-06-19 | TYR | B:154 | B:654 | 2.0 | 0.009 | H | -59.2 | -46.1 | 2.0 | 0.009 | 0.0 |
FPP U66 HOH |
4.409 7.291 2.771 |
CE2 CE2 OH |
C15 C5 O |
||
1ld8 | 2 | P49356 | 100.0 | 0.0 |
X-RAY |
2002-06-19 | TYR | B:154 | B:654 | 2.0 | 0.009 | H | -58.9 | -46.9 | 2.0 | 0.009 | 0.0 |
ACY FPP U49 HOH |
9.849 4.314 7.304 2.833 |
CD2 CE2 CD2 OH |
CH3 C15 C7 O |
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1mzc | 2 | P49356 | 100.0 | 0.0 |
X-RAY |
2003-07-08 | TYR | B:154 | B:654 | 3.0 | 0.013 | H | -60.8 | -47.6 | 3.0 | 0.013 | 0.0 |
FPP BNE HOH |
4.621 6.587 2.887 |
CE2 CE2 OH |
C15 C13 O |
||
1s63 | 2 | P49356 | 100.0 | 0.0 |
X-RAY |
2004-07-27 | TYR | B:154 | B:154 | 2.0 | 0.009 | H | -57.0 | -47.7 | 2.0 | 0.009 | 0.0 |
FPP 778 HOH |
4.550 6.689 2.851 |
CE2 CE2 OH |
C15 CL31 O |
||
1sa4 | 2 | P49356 | 100.0 | 0.0 |
X-RAY |
2004-06-08 | TYR | B:154 | B:154 | 3.0 | 0.013 | H | -58.7 | -47.3 | 3.0 | 0.013 | 0.0 |
FPP JAN HOH |
4.612 7.815 2.765 |
CE2 CE2 OH |
C15 CL2 O |
||
1tn6 | 2 | P49356 | 100.0 | 0.0 |
X-RAY |
2004-11-02 | TYR | B:154 | B:654 | 2.0 | 0.009 | H | -60.0 | -46.2 | 2.0 | 0.009 | 0.0 |
FII HOH |
4.429 2.851 |
CE2 OH |
C6 O |
||
2f0y | 2 | P49356 | 100.0 | 0.0 |
X-RAY |
2006-11-14 | TYR | B:154 | B:154 | 3.0 | 0.013 | H | -64.4 | -43.8 | 3.0 | 0.013 | 0.0 |
FPP 3MN HOH |
4.895 6.790 2.798 |
CE2 CD2 OH |
C15 C27 O |
||
2h6f | 2 | P49356 | 100.0 | 0.0 |
X-RAY |
2006-08-29 | TYR | B:154 | B:654 | 3.0 | 0.013 | H | -57.9 | -46.4 | 3.0 | 0.013 | 0.0 |
FAR HOH |
4.094 2.786 |
CE2 OH |
C15 O |
||
2iej | 2 | P49356 | 100.0 | 0.0 |
X-RAY |
2007-01-23 | TYR | B:154 | B:654 | 3.0 | 0.013 | H | -54.5 | -50.2 | 3.0 | 0.013 | 0.0 |
S48 FII HOH |
6.006 4.451 2.910 |
CE2 CD2 OH |
CAA C6 O |
||
3e37 | 2 | P49356 | 100.0 | 0.0 |
X-RAY |
2009-03-10 | TYR | B:154 | B:156 | 5.0 | 0.022 | H | -54.4 | -50.1 | 5.0 | 0.022 | 0.0 |
ED5 HOH |
3.602 2.835 |
CD2 OH |
CAC O |
||
2h6h | 2 | P49356 | 99.77 | 0.0 |
X-RAY |
2006-08-29 | TYR | B:154 | B:654 | 3.0 | 0.013 | H | -58.8 | -46.7 | 3.0 | 0.013 | 0.0 |
FAR HOH |
4.172 2.814 |
CE2 OH |
C15 O |
||
2h6g | 2 | P49356 | 99.77 | 0.0 |
X-RAY |
2006-08-29 | TYR | B:154 | B:654 | 17.0 | 0.074 | H | -58.8 | -46.6 | 17.0 | 0.074 | 0.0 |
GER HOH |
3.287 2.918 |
CD2 OH |
C19 O |
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2h6i | 2 | P49356 | 99.54 | 0.0 |
X-RAY |
2006-08-29 | TYR | B:154 | B:654 | 24.0 | 0.104 | H | -57.6 | -49.9 | 24.0 | 0.104 | 0.0 |
GER HOH |
3.451 3.328 |
CD2 O |
C17 O |
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1o1r | 2 | Q02293 | 98.12 | 0.0 |
X-RAY |
2003-05-06 | TYR | B:154 | B:154 | 2.0 | 0.009 | H | -63.4 | -45.1 | 2.0 | 0.009 | 0.0 |
GRG HOH |
3.865 2.986 |
CE2 OH |
C19 O |
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1o1s | 2 | Q02293 | 98.12 | 0.0 |
X-RAY |
2003-05-06 | TYR | B:154 | B:154 | 2.0 | 0.009 | H | -62.1 | -46.6 | 2.0 | 0.009 | 0.0 |
1NH HOH |
4.922 3.000 |
CD2 OH |
C12 O |
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1o1t | 2 | Q02293 | 98.12 | 0.0 |
X-RAY |
2003-05-06 | TYR | B:154 | B:154 | 2.0 | 0.009 | H | -61.4 | -44.7 | 2.0 | 0.009 | 0.0 |
2NH HOH |
4.096 2.860 |
CE2 OH |
C14 O |
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3eu5 | 2 | Q02293 | 98.12 | 0.0 |
X-RAY |
2009-07-07 | TYR | B:154 | B:154 | 3.0 | 0.013 | H | -58.1 | -41.6 | 3.0 | 0.013 | 0.0 |
GBO HOH |
6.023 8.371 |
CE2 CD2 |
O6 O |
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4gtm | 2 | Q02293 | 98.12 | 0.0 |
X-RAY |
2012-10-24 | TYR | B:154 | B:154 | 4.0 | 0.017 | H | -55.1 | -49.8 | 4.0 | 0.017 | 0.0 |
FPP 7TM HOH |
4.370 6.730 2.903 |
CE2 CD2 OH |
C14 OAE O |
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4gto | 2 | Q02293 | 98.12 | 0.0 |
X-RAY |
2012-10-24 | TYR | B:154 | B:154 | 5.0 | 0.022 | H | -58.4 | -45.3 | 5.0 | 0.022 | 0.0 |
7TO HOH |
3.552 2.904 |
CD2 OH |
FAH O |
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4gtp | 2 | Q02293 | 98.12 | 0.0 |
X-RAY |
2012-10-24 | TYR | B:154 | B:154 | 3.0 | 0.013 | H | -71.3 | -38.3 | 3.0 | 0.013 | 0.0 |
FPP 7TP DMS HOH |
4.278 7.863 9.091 2.948 |
CE2 CD2 CD2 OH |
C14 CAI S O |
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4gtq | 2 | Q02293 | 98.12 | 0.0 |
X-RAY |
2012-10-24 | TYR | B:154 | B:154 | 4.0 | 0.017 | H | -62.0 | -42.3 | 4.0 | 0.017 | 0.0 |
FPP 7TQ HOH |
4.667 7.545 2.686 |
CE2 CD2 OH |
C15 OBH O |
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4gtr | 2 | Q02293 | 98.12 | 0.0 |
X-RAY |
2012-10-24 | TYR | B:154 | B:154 | 17.0 | 0.074 | H | -55.8 | -44.5 | 17.0 | 0.074 | 0.0 |
7TR FPP HOH |
3.829 5.544 2.868 |
CE2 CE2 OH |
CAW C14 O |
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3pz4 | 2 | Q02293 | 98.11 | 0.0 |
X-RAY |
2011-05-11 | TYR | B:153 | B:154 | 3.0 | 0.013 | H | -46.3 | -51.2 | 3.0 | 0.013 | 0.0 |
FPP 3PZ HOH |
4.239 6.987 2.942 |
CE2 CE2 OH |
C15 C16 O |
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1d8d | 2 | Q02293 | 96.57 | 0.0 |
X-RAY |
2000-02-09 | TYR | B:154 | B:154 | 2.0 | 0.009 | H | -62.4 | -49.2 | 2.0 | 0.009 | 0.0 |
FII HOH |
4.580 2.867 |
CE2 OH |
C6 O |
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1d8e | 2 | Q02293 | 96.57 | 0.0 |
X-RAY |
2000-03-20 | TYR | B:154 | B:154 | 3.0 | 0.013 | H | -61.4 | -50.2 | 3.0 | 0.013 | 0.0 |
FII HOH |
4.484 2.767 |
CE2 O |
C6 O |
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1fpp | 1 | Q02293 | 96.57 | 0.0 |
X-RAY |
1999-06-08 | TYR | A:154 | B:154 | 4.0 | 0.017 | H | -68.7 | -42.9 | 4.0 | 0.017 | 0.0 |
FPP HOH |
4.349 3.070 |
CE1 OH |
C15 O |
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1ft1 | 2 | Q02293 | 96.57 | 0.0 |
X-RAY |
1998-03-18 | TYR | B:154 | B:154 | 4.0 | 0.017 | H | -60.0 | -50.2 | 4.0 | 0.017 | 0.0 |
HOH |
2.963 |
OH |
O |
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1jcr | 2 | Q02293 | 96.57 | 0.0 |
X-RAY |
2001-11-02 | TYR | B:154 | B:154 | 2.0 | 0.009 | H | -62.2 | -46.5 | 2.0 | 0.009 | 0.0 |
FPP HOH |
4.551 2.932 |
CE2 OH |
C15 O |
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1jcs | 2 | Q02293 | 96.57 | 0.0 |
X-RAY |
2001-11-02 | TYR | B:154 | B:154 | 2.0 | 0.009 | H | -64.2 | -45.3 | 2.0 | 0.009 | 0.0 |
FII HOH |
4.401 2.903 |
CE2 OH |
C6 O |
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1kzo | 2 | Q02293 | 96.57 | 0.0 |
X-RAY |
2002-10-16 | TYR | B:154 | B:154 | 1.0 | 0.004 | H | -62.4 | -47.1 | 1.0 | 0.004 | 0.0 |
FPP HOH |
4.609 2.855 |
CE2 OH |
C15 O |
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1kzp | 2 | Q02293 | 96.57 | 0.0 |
X-RAY |
2002-10-16 | TYR | B:154 | B:154 | 2.0 | 0.009 | H | -64.1 | -45.9 | 2.0 | 0.009 | 0.0 |
FAR HOH |
4.453 2.829 |
CE2 OH |
C15 O |
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1o5m | 2 | Q02293 | 96.57 | 0.0 |
X-RAY |
2003-10-21 | TYR | B:154 | B:154 | 2.0 | 0.009 | H | -64.1 | -44.3 | 2.0 | 0.009 | 0.0 |
FPP 336 HOH |
4.321 6.127 2.980 |
CE2 CE2 OH |
C14 CL16 O |
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1qbq | 2 | Q02293 | 96.57 | 0.0 |
X-RAY |
1999-06-18 | TYR | B:154 | B:154 | 2.0 | 0.009 | H | -57.8 | -45.5 | 2.0 | 0.009 | 0.0 |
HFP HOH |
4.480 2.714 |
CE2 OH |
C15 O |
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1sa5 | 2 | Q02293 | 96.57 | 0.0 |
X-RAY |
2004-06-08 | TYR | B:154 | B:154 | 2.0 | 0.009 | H | -70.2 | -32.6 | 2.0 | 0.009 | 0.0 |
FPP BMV HOH |
4.389 6.743 2.898 |
CE2 CE2 OH |
C15 CAE O |
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1tn7 | 2 | Q02293 | 96.57 | 0.0 |
X-RAY |
2004-11-02 | TYR | B:154 | B:654 | 3.0 | 0.013 | H | -62.9 | -45.1 | 3.0 | 0.013 | 0.0 |
FII HOH |
4.505 2.967 |
CE2 OH |
C6 O |
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1tn8 | 2 | Q02293 | 96.57 | 0.0 |
X-RAY |
2004-11-02 | TYR | B:154 | B:654 | 3.0 | 0.013 | H | -62.7 | -45.8 | 3.0 | 0.013 | 0.0 |
FII HOH |
4.461 2.972 |
CE2 OH |
C6 O |
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3dpy | 2 | Q02293 | 96.57 | 0.0 |
X-RAY |
2008-09-30 | TYR | B:154 | B:154 | 3.0 | 0.013 | H | -63.1 | -36.6 | 3.0 | 0.013 | 0.0 |
FPP HOH |
4.420 9.631 |
CE2 N |
C15 O |
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3e30 | 2 | Q02293 | 96.57 | 0.0 |
X-RAY |
2009-03-10 | TYR | B:154 | B:154 | 4.0 | 0.017 | H | -59.8 | -42.7 | 4.0 | 0.017 | 0.0 |
FPP ED4 HOH |
4.742 7.886 2.973 |
CE2 CD2 OH |
C14 CAU O |
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3e32 | 2 | Q02293 | 96.57 | 0.0 |
X-RAY |
2009-03-10 | TYR | B:154 | B:154 | 4.0 | 0.017 | H | -59.0 | -45.0 | 4.0 | 0.017 | 0.0 |
FPP ED2 HOH |
4.707 8.043 9.326 |
CE2 CD2 N |
C14 CAH O |
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3e33 | 2 | Q02293 | 96.57 | 0.0 |
X-RAY |
2009-03-10 | TYR | B:154 | B:154 | 2.0 | 0.009 | H | -55.3 | -49.2 | 2.0 | 0.009 | 0.0 |
FPP ED7 HOH |
4.421 7.894 2.866 |
CE2 CD2 OH |
C15 CAL O |
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3e34 | 2 | Q02293 | 96.57 | 0.0 |
X-RAY |
2009-03-10 | TYR | B:154 | B:154 | 3.0 | 0.013 | H | -55.8 | -47.5 | 3.0 | 0.013 | 0.0 |
FPP ED1 HOH |
4.610 6.830 2.955 |
CE2 CE2 OH |
C15 CAL O |
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3ksl | 2 | Q02293 | 96.57 | 0.0 |
X-RAY |
2009-12-22 | TYR | B:154 | B:154 | 3.0 | 0.013 | H | -61.1 | -47.5 | 3.0 | 0.013 | 0.0 |
SZH HOH |
3.612 2.807 |
CE2 OH |
F26 O |
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3ksq | 2 | Q02293 | 96.57 | 0.0 |
X-RAY |
2010-01-26 | TYR | B:154 | B:154 | 2.0 | 0.009 | H | -61.8 | -47.4 | 2.0 | 0.009 | 0.0 |
FPP Z96 HOH |
4.321 8.021 2.789 |
CE2 CE2 OH |
C14 C5 O |
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7rn5 | 2 | Q02293 | 96.57 | 0.0 |
X-RAY |
2021-09-08 | TYR | B:154 | B:154 | 4.0 | 0.017 | H | -57.7 | -47.8 | 4.0 | 0.017 | 0.0 |
60I HOH |
3.306 2.823 |
CD2 OH |
H21 O |
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7rni | 2 | Q02293 | 96.57 | 0.0 |
X-RAY |
2021-09-08 | TYR | B:154 | B:154 | 4.0 | 0.017 | H | -58.9 | -48.4 | 4.0 | 0.017 | 0.0 |
ACE 60I HOH |
9.114 3.363 2.731 |
HE1 CD2 OH |
H1 H21 O |
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2zir | 2 | Q02293 | 96.57 | 0.0 |
X-RAY |
2009-02-24 | TYR | B:157 | B:154 | 2.0 | 0.009 | H | -65.8 | -41.5 | 2.0 | 0.009 | 0.0 |
FPP NH7 HOH |
4.462 8.486 2.878 |
CE2 CD2 OH |
C14 C34 O |
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2zis | 2 | Q02293 | 96.57 | 0.0 |
X-RAY |
2009-02-24 | TYR | B:157 | B:154 | 3.0 | 0.013 | H | -68.0 | -40.8 | 3.0 | 0.013 | 0.0 |
FPP NH8 HOH |
4.368 7.218 2.754 |
CE2 CE2 OH |
C14 N38 O |
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3euv | 2 | Q02293 | 97.65 | 0.0 |
X-RAY |
2009-07-07 | THR | B:154 | B:154 | 11.0 | 0.079 | H | -64.2 | -37.3 | 11.0 | 0.079 | 0.0 |
GBO HOH |
3.804 4.030 |
CB CG2 |
S1 O |
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1n95 | 2 | Q02293 | 98.26 | 0.0 |
X-RAY |
2003-01-07 | TYR | B:133 | B:154 | 2.0 | 0.009 | H | -55.3 | -45.1 | 2.0 | 0.009 | 0.0 |
HFP FTH |
4.526 7.009 |
CE2 CE2 |
C15 C30 |
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1n9a | 2 | Q02293 | 98.26 | 0.0 |
X-RAY |
2003-01-07 | TYR | B:133 | B:154 | 2.0 | 0.009 | H | -53.3 | -45.8 | 2.0 | 0.009 | 0.0 |
HFP FTI |
4.534 8.307 |
CE2 CE2 |
C15 C11 |
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1ni1 | 2 | Q02293 | 98.26 | 0.0 |
X-RAY |
2004-04-06 | TYR | B:133 | B:154 | 2.0 | 0.009 | H | -59.6 | -48.3 | 2.0 | 0.009 | 0.0 |
HFP 2C5 |
4.204 7.205 |
CE2 CE2 |
C15 CL1 |
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1nl4 | 2 | Q02293 | 98.25 | 0.0 |
X-RAY |
2003-02-11 | TYR | B:132 | B:154 | 3.0 | 0.013 | H | -58.7 | -44.8 | 3.0 | 0.013 | 0.0 |
HFP FTL |
4.033 7.034 |
CE2 CE2 |
C15 C54 |
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2bed | 2 | Q02293 | 98.25 | 0.0 |
X-RAY |
2006-08-08 | TYR | B:132 | B:154 | 2.0 | 0.009 | H | -54.1 | -56.3 | 2.0 | 0.009 | 0.0 |
FPP 736 HOH |
4.529 7.166 3.596 |
CE2 CD2 O |
C14 C6 O |
||
2r2l | 2 | Q02293 | 98.25 | 0.0 |
X-RAY |
2008-03-11 | TYR | B:132 | B:154 | 2.0 | 0.009 | H | -61.1 | -43.0 | 2.0 | 0.009 | 0.0 |
FPP PB9 HOH |
4.539 7.971 2.853 |
CE2 CD2 OH |
C14 C40 O |
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1ft2 | 2 | Q02293 | 98.25 | 0.0 |
X-RAY |
1998-11-04 | TYR | B:133 | B:154 | 10.0 | 0.043 | H | -53.7 | -48.3 | 10.0 | 0.043 | 0.0 |
FPP |
5.163 |
CE2 |
C15 |
||
1n94 | 2 | Q02293 | 98.24 | 0.0 |
X-RAY |
2003-01-07 | TYR | B:133 | B:154 | 5.0 | 0.022 | H | -67.0 | -64.1 | 5.0 | 0.022 | 0.0 |
HFP TIN |
5.503 8.303 |
CE2 CD2 |
C15 C55 |
||
1x81 | 2 | Q02293 | 98.24 | 0.0 |
X-RAY |
2004-12-21 | TYR | B:133 | B:154 | 5.0 | 0.022 | H | -75.0 | -29.9 | 5.0 | 0.022 | 0.0 |
JAN |
8.281 |
CE2 |
CL2 |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p49356-f1 | 1 | P49356 | 100.0 | 0.0 | TYR | A:154 | A:154 | 1.0 | 0.004 | H | -56.2 | -50.0 |