Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr14 66083058 . A C CCDS9775.1:NM_178155.2:c.449gAt>gCt_NP_835368.1:p.150D>A Homo sapiens fucosyltransferase 8 (FUT8), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
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auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6x5h 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 ASP A:110 A:150 103.0 0.687 H -69.4 -44.0 71.0 0.473 0.214 D:Q9BYC5:0.213
 HOH
 2.598
 OD1
 O
ASP B:110 B:150 98.0 0.653 H -69.4 -42.6 NA NA NA
ASP C:110 C:150 100.0 0.667 H -69.8 -43.2 NA NA NA
ASP D:110 D:150 98.0 0.653 H -68.6 -44.1 NA NA NA
6x5r 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 ASP A:110 A:150 99.0 0.66 H -71.1 -40.7 NA NA NA
ASP B:110 B:150 101.0 0.673 H -70.0 -41.1 73.0 0.487 0.186 A:Q9BYC5:0.187
 HOH
 3.771
 CB
 O
6x5t 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 ASP A:110 A:150 102.0 0.68 H -66.6 -49.9 73.0 0.487 0.193 B:Q9BYC5:0.193
 HOH
 6.940
 C
 O
ASP B:110 B:150 94.0 0.627 H -66.2 -49.2 66.0 0.44 0.187 A:Q9BYC5:0.187
 HOH
 7.966
 O
 O
ASP C:110 C:150 99.0 0.66 H -65.7 -48.4 NA NA NA
ASP D:110 D:150 101.0 0.673 H -66.8 -49.0 NA NA NA
ASP E:110 E:150 100.0 0.667 H -66.4 -48.8 NA NA NA
ASP F:110 F:150 98.0 0.653 H -67.3 -48.2 NA NA NA
ASP G:110 G:150 103.0 0.687 H -66.1 -48.5 NA NA NA
ASP H:110 H:150 93.0 0.62 H -65.5 -48.9 NA NA NA
6x5u 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 ASP A:110 A:150 96.0 0.64 H -70.5 -43.4 68.0 0.453 0.187 B:Q9BYC5:0.187
 HOH
 7.737
 N
 O
ASP B:110 B:150 95.0 0.633 H -70.2 -42.1 67.0 0.447 0.186 A:Q9BYC5:0.187
 HOH
 3.292
 OD2
 O
ASP C:110 C:150 95.0 0.633 H -69.0 -43.5 NA NA NA
ASP D:110 D:150 100.0 0.667 H -69.6 -42.7 NA NA NA
ASP E:110 E:150 99.0 0.66 H -69.7 -43.2 NA NA NA
ASP F:110 F:150 94.0 0.627 H -69.3 -43.5 NA NA NA
ASP G:110 G:150 98.0 0.653 H -69.9 -43.3 NA NA NA
ASP H:110 H:150 96.0 0.64 H -69.8 -43.6 NA NA NA
2de0 1 Q9BYC5 100.0 0.0 X-RAY
 2006-12-26 ASP A:88 X:150 92.0 0.613 H -81.4 -35.1 66.0 0.44 0.173 A:Q9BYC5:0.173
 HOH
 7.078
 C
 O
6vlf 1 Q9WTS2 96.07 0.0 X-RAY
 2020-02-26 ASP A:118 A:150 100.0 0.667 H -62.7 -43.1 69.0 0.46 0.207 B:Q9WTS2:0.207
 HOH
 2.765
 O
 O
ASP B:118 B:150 98.0 0.653 H -63.8 -40.9 69.0 0.46 0.193 A:Q9WTS2:0.193
 HOH
 2.849
 O
 O
6vlg 1 Q9WTS2 96.07 0.0 X-RAY
 2020-02-26 ASP A:118 A:150 105.0 0.7 H -64.2 -40.5 NA NA NA
ASP B:118 B:150 94.0 0.627 H -60.6 -42.7 NA NA NA
ASP C:118 C:150 100.0 0.667 H -67.9 -38.6 70.0 0.467 0.2 A:Q9WTS2:0.2
 HOH
 2.823
 O
 O
ASP D:118 D:150 99.0 0.66 H -71.1 -35.6 NA NA NA
6vld 1 Q9BYC5 100.0 0.0 X-RAY
 2020-02-26 ASP A:46 A:150 92.0 0.613 H -68.0 -43.7 69.0 0.46 0.153 D:Q9BYC5:0.153
 HOH
 6.246
 O
 O
ASP B:46 B:150 88.0 0.587 H -75.6 -38.9 NA NA NA
ASP C:46 G:150 101.0 0.673 H -69.5 -42.1 NA NA NA
ASP D:46 H:150 89.0 0.593 H -70.1 -43.5 68.0 0.453 0.14 A:Q9BYC5:0.14
 HOH
 6.302
 O
 O
6vle 1 Q9BYC5 100.0 0.0 X-RAY
 2020-02-26 ASP A:46 A:150 96.0 0.64 H -66.4 -46.1 68.0 0.453 0.187 B:Q9BYC5:0.187
 HOH
 6.557
 C
 O
ASP B:46 B:150 94.0 0.627 H -67.9 -44.5 65.0 0.433 0.194 A:Q9BYC5:0.193
 HOH
 7.218
 O
 O
6tkv 1 Q9BYC5 100.0 0.0 X-RAY
 2020-01-29 ASP A:44 A:150 105.0 0.7 H -66.4 -44.1 NA NA NA
6x5s 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 ASP A:43 A:150 100.0 0.667 H -70.3 -41.3 73.0 0.487 0.18 B:Q9BYC5:0.18
ASP B:43 B:150 98.0 0.653 H -70.4 -39.4 NA NA NA
6tkv 2 Q9BYC5 96.79 0.0 X-RAY
 2020-01-29 ASP B:43 B:150 106.0 0.707 H -64.9 -46.3 78.0 0.52 0.187 A:Q9BYC5:0.187
 GOL
HOH
 6.786
7.490
 C
O
 O1
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q9byc5-f1 1 Q9BYC5 100.0 0.0 ASP A:150 A:150 100.0 0.667 H -66.9 -45.3