Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr14 66083066 . C A CCDS9775.1:NM_178155.2:c.457Ctt>Att_NP_835368.1:p.153L>I Homo sapiens fucosyltransferase 8 (FUT8), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6x5h 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 LEU A:113 A:153 114.0 0.671 H -60.8 -43.1 33.0 0.194 0.477 D:Q9BYC5:0.476
 HOH
 3.174
 O
 O
LEU B:113 B:153 112.0 0.659 H -61.0 -42.4 NA NA NA
LEU C:113 C:153 110.0 0.647 H -62.4 -43.8 NA NA NA
LEU D:113 D:153 111.0 0.653 H -61.6 -44.3 NA NA NA
6x5r 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 LEU A:113 A:153 111.0 0.653 H -65.5 -37.2 NA NA NA
LEU B:113 B:153 113.0 0.665 H -65.2 -37.3 35.0 0.206 0.459 A:Q9BYC5:0.459
 HOH
 2.849
 O
 O
6x5t 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 LEU A:113 A:153 115.0 0.676 H -61.9 -40.7 43.0 0.253 0.423 B:Q9BYC5:0.424
 HOH
 3.998
 O
 O
LEU B:113 B:153 113.0 0.665 H -61.8 -42.3 41.0 0.241 0.424 A:Q9BYC5:0.424
 HOH
 6.631
 O
 O
LEU C:113 C:153 120.0 0.706 H -61.6 -41.8 NA NA NA
LEU D:113 D:153 116.0 0.682 H -62.0 -41.7 NA NA NA
LEU E:113 E:153 111.0 0.653 H -60.7 -41.2 NA NA NA
LEU F:113 F:153 116.0 0.682 H -61.6 -43.0 NA NA NA
LEU G:113 G:153 116.0 0.682 H -61.8 -41.4 NA NA NA
LEU H:113 H:153 109.0 0.641 H -61.3 -42.1 NA NA NA
6x5u 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 LEU A:113 A:153 115.0 0.676 H -60.4 -36.4 38.0 0.224 0.452 B:Q9BYC5:0.453
 HOH
 4.691
 O
 O
LEU B:113 B:153 108.0 0.635 H -59.9 -36.0 35.0 0.206 0.429 A:Q9BYC5:0.429
 HOH
 6.851
 CD1
 O
LEU C:113 C:153 116.0 0.682 H -60.2 -36.5 NA NA NA
LEU D:113 D:153 115.0 0.676 H -61.1 -35.2 NA NA NA
LEU E:113 E:153 115.0 0.676 H -60.9 -38.0 NA NA NA
LEU F:113 F:153 113.0 0.665 H -59.7 -36.8 NA NA NA
LEU G:113 G:153 111.0 0.653 H -60.0 -35.5 NA NA NA
LEU H:113 H:153 111.0 0.653 H -60.8 -37.0 NA NA NA
2de0 1 Q9BYC5 100.0 0.0 X-RAY
 2006-12-26 LEU A:91 X:153 112.0 0.659 H -56.5 -50.8 32.0 0.188 0.471 A:Q9BYC5:0.471
 HOH
 6.180
 N
 O
6vlf 1 Q9WTS2 96.07 0.0 X-RAY
 2020-02-26 LEU A:121 A:153 115.0 0.676 H -64.1 -41.1 22.0 0.129 0.547 B:Q9WTS2:0.547
 EDO
HOH
 8.482
2.853
 O
O
 C1
O
LEU B:121 B:153 115.0 0.676 H -58.1 -41.9 26.0 0.153 0.523 A:Q9WTS2:0.524
 HOH
 3.135
 O
 O
6vlg 1 Q9WTS2 96.07 0.0 X-RAY
 2020-02-26 LEU A:121 A:153 118.0 0.694 H -63.8 -43.3 NA NA NA
LEU B:121 B:153 114.0 0.671 H -62.2 -46.1 NA NA NA
LEU C:121 C:153 112.0 0.659 H -69.7 -39.5 22.0 0.129 0.53 A:Q9WTS2:0.529
 HOH
 3.274
 O
 O
LEU D:121 D:153 116.0 0.682 H -62.1 -40.8 NA NA NA
6vld 1 Q9BYC5 100.0 0.0 X-RAY
 2020-02-26 LEU A:49 A:153 114.0 0.671 H -65.8 -37.8 32.0 0.188 0.483 D:Q9BYC5:0.482
 HOH
 2.818
 O
 O
LEU B:49 B:153 113.0 0.665 H -62.3 -37.6 NA NA NA
LEU C:49 G:153 117.0 0.688 H -64.1 -37.1 NA NA NA
LEU D:49 H:153 117.0 0.688 H -64.0 -40.0 39.0 0.229 0.459 A:Q9BYC5:0.459
 HOH
 2.993
 O
 O
6vle 1 Q9BYC5 100.0 0.0 X-RAY
 2020-02-26 LEU A:49 A:153 112.0 0.659 H -63.9 -41.3 41.0 0.241 0.418 B:Q9BYC5:0.418
 HOH
 4.160
 O
 O
LEU B:49 B:153 115.0 0.676 H -65.3 -39.2 21.0 0.124 0.552 A:Q9BYC5:0.553
 HOH
 4.042
 O
 O
6tkv 1 Q9BYC5 100.0 0.0 X-RAY
 2020-01-29 LEU A:47 A:153 114.0 0.671 H -59.4 -44.6 NA NA NA
6x5s 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 LEU A:46 A:153 111.0 0.653 H -60.5 -41.6 36.0 0.212 0.441 B:Q9BYC5:0.441
LEU B:46 B:153 112.0 0.659 H -58.4 -39.5 NA NA NA
6tkv 2 Q9BYC5 96.79 0.0 X-RAY
 2020-01-29 LEU B:46 B:153 115.0 0.676 H -60.0 -44.7 28.0 0.165 0.511 A:Q9BYC5:0.512
 GOL
HOH
 5.833
4.239
 N
CD2
 O1
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q9byc5-f1 1 Q9BYC5 100.0 0.0 LEU A:153 A:153 113.0 0.665 H -64.6 -37.4