Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr14 66096221 . C A CCDS9775.1:NM_178155.2:c.494aCg>aAg_NP_835368.1:p.165T>K Homo sapiens fucosyltransferase 8 (FUT8), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6x5h 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 THR A:125 A:165 8.0 0.057 H -66.7 -44.2 4.0 0.029 0.028 D:Q9BYC5:0.029
 HOH
 2.905
 OG1
 O
THR B:125 B:165 8.0 0.057 H -65.7 -43.9 NA NA NA
THR C:125 C:165 7.0 0.05 H -66.2 -42.0 NA NA NA
THR D:125 D:165 7.0 0.05 H -66.3 -42.8 NA NA NA
6x5r 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 THR A:125 A:165 4.0 0.029 H -66.1 -43.6 NA NA NA
THR B:125 B:165 4.0 0.029 H -67.2 -41.2 3.0 0.021 0.008 A:Q9BYC5:0.007
 HOH
 2.671
 OG1
 O
6x5t 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 THR A:125 A:165 5.0 0.036 H -70.4 -45.8 4.0 0.029 0.007 B:Q9BYC5:0.007
 HOH
 4.809
 N
 O
THR B:125 B:165 5.0 0.036 H -70.5 -45.1 2.0 0.014 0.022 A:Q9BYC5:0.021
 HOH
 2.657
 OG1
 O
THR C:125 C:165 5.0 0.036 H -70.7 -45.4 NA NA NA
THR D:125 D:165 6.0 0.043 H -70.7 -45.8 NA NA NA
THR E:125 E:165 6.0 0.043 H -70.8 -46.7 NA NA NA
THR F:125 F:165 6.0 0.043 H -69.7 -45.7 NA NA NA
THR G:125 G:165 5.0 0.036 H -71.1 -46.1 NA NA NA
THR H:125 H:165 7.0 0.05 H -70.3 -46.4 NA NA NA
6x5u 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 THR A:125 A:165 5.0 0.036 H -64.0 -47.0 3.0 0.021 0.015 B:Q9BYC5:0.014
 HOH
 3.390
 CG2
 O
THR B:125 B:165 7.0 0.05 H -63.9 -45.8 4.0 0.029 0.021 A:Q9BYC5:0.021
 HOH
 6.686
 CB
 O
THR C:125 C:165 5.0 0.036 H -64.3 -46.1 NA NA NA
THR D:125 D:165 6.0 0.043 H -64.4 -47.4 NA NA NA
THR E:125 E:165 5.0 0.036 H -63.8 -47.3 NA NA NA
THR F:125 F:165 5.0 0.036 H -64.5 -46.9 NA NA NA
THR G:125 G:165 6.0 0.043 H -64.7 -47.0 NA NA NA
THR H:125 H:165 6.0 0.043 H -64.1 -46.6 NA NA NA
2de0 1 Q9BYC5 100.0 0.0 X-RAY
 2006-12-26 THR A:103 X:165 6.0 0.043 H -64.6 -34.6 4.0 0.029 0.014 A:Q9BYC5:0.014
 HOH
 2.945
 OG1
 O
6vlf 1 Q9WTS2 96.07 0.0 X-RAY
 2020-02-26 THR A:133 A:165 7.0 0.05 H -67.3 -44.1 3.0 0.021 0.029 B:Q9WTS2:0.029
 HOH
 2.746
 OG1
 O
THR B:133 B:165 8.0 0.057 H -63.5 -46.3 4.0 0.029 0.028 A:Q9WTS2:0.029
 HOH
 2.823
 OG1
 O
6vlg 1 Q9WTS2 96.07 0.0 X-RAY
 2020-02-26 THR A:133 A:165 8.0 0.057 H -61.3 -46.6 NA NA NA
THR B:133 B:165 7.0 0.05 H -57.4 -50.8 NA NA NA
THR C:133 C:165 7.0 0.05 H -62.4 -46.3 4.0 0.029 0.021 A:Q9WTS2:0.021
 PG4
HOH
 6.537
2.830
 O
OG1
 H71
O
THR D:133 D:165 7.0 0.05 H -62.6 -48.2 NA NA NA
6vld 1 Q9BYC5 100.0 0.0 X-RAY
 2020-02-26 THR A:61 A:165 8.0 0.057 H -69.2 -41.6 4.0 0.029 0.028 D:Q9BYC5:0.029
 HOH
 2.754
 OG1
 O
THR B:61 B:165 7.0 0.05 H -69.3 -43.5 NA NA NA
THR C:61 G:165 6.0 0.043 H -69.0 -42.8 NA NA NA
THR D:61 H:165 7.0 0.05 H -63.6 -45.9 4.0 0.029 0.021 A:Q9BYC5:0.021
 HOH
 2.845
 OG1
 O
6vle 1 Q9BYC5 100.0 0.0 X-RAY
 2020-02-26 THR A:61 A:165 7.0 0.05 H -65.4 -44.5 4.0 0.029 0.021 B:Q9BYC5:0.021
 HOH
 2.624
 OG1
 O
THR B:61 B:165 6.0 0.043 H -66.8 -49.5 3.0 0.021 0.022 A:Q9BYC5:0.021
 HOH
 2.847
 OG1
 O
6tkv 1 Q9BYC5 100.0 0.0 X-RAY
 2020-01-29 THR A:59 A:165 6.0 0.043 H -63.9 -44.1 NA NA NA
6x5s 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 THR A:58 A:165 6.0 0.043 H -65.1 -44.1 4.0 0.029 0.014 B:Q9BYC5:0.014
THR B:58 B:165 5.0 0.036 H -65.4 -44.2 NA NA NA
6tkv 2 Q9BYC5 96.79 0.0 X-RAY
 2020-01-29 THR B:58 B:165 9.0 0.064 H -62.5 -45.1 6.0 0.043 0.021 A:Q9BYC5:0.021
 GOL
HOH
 7.007
2.680
 O
OG1
 C2
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q9byc5-f1 1 Q9BYC5 100.0 0.0 THR A:165 A:165 6.0 0.043 H -66.3 -44.4