Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr14 66096286 . C A CCDS9775.1:NM_178155.2:c.559Ctg>Atg_NP_835368.1:p.187L>M Homo sapiens fucosyltransferase 8 (FUT8), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
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auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6x5h 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 LEU A:147 A:187 0.0 0.0 H -63.0 -46.5 0.0 0.0 0.0 HOH
 4.830
 N
 O
LEU B:147 B:187 0.0 0.0 H -63.3 -45.3 NA NA NA
LEU C:147 C:187 0.0 0.0 H -62.6 -46.0 NA NA NA
LEU D:147 D:187 0.0 0.0 H -62.4 -47.0 NA NA NA
6x5r 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 LEU A:147 A:187 0.0 0.0 H -63.5 -36.7 NA NA NA
LEU B:147 B:187 0.0 0.0 H -63.2 -40.6 0.0 0.0 0.0 HOH
 5.166
 CD2
 O
6x5t 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 LEU A:147 A:187 1.0 0.006 H -70.8 -44.8 1.0 0.006 0.0 HOH
 6.521
 C
 O
LEU B:147 B:187 1.0 0.006 H -71.2 -45.3 1.0 0.006 0.0 HOH
 5.903
 CD2
 O
LEU C:147 C:187 1.0 0.006 H -69.7 -44.9 NA NA NA
LEU D:147 D:187 1.0 0.006 H -71.4 -44.6 NA NA NA
LEU E:147 E:187 1.0 0.006 H -70.3 -44.9 NA NA NA
LEU F:147 F:187 1.0 0.006 H -70.6 -44.9 NA NA NA
LEU G:147 G:187 0.0 0.0 H -70.1 -46.2 NA NA NA
LEU H:147 H:187 1.0 0.006 H -72.2 -45.7 NA NA NA
6x5u 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 LEU A:147 A:187 1.0 0.006 H -61.0 -46.3 1.0 0.006 0.0 HOH
 6.382
 C
 O
LEU B:147 B:187 2.0 0.012 H -62.3 -48.3 2.0 0.012 0.0
LEU C:147 C:187 1.0 0.006 H -62.0 -47.7 NA NA NA
LEU D:147 D:187 0.0 0.0 H -61.4 -47.9 NA NA NA
LEU E:147 E:187 0.0 0.0 H -61.9 -47.5 NA NA NA
LEU F:147 F:187 1.0 0.006 H -62.4 -48.1 NA NA NA
LEU G:147 G:187 0.0 0.0 H -61.5 -47.7 NA NA NA
LEU H:147 H:187 1.0 0.006 H -62.9 -47.7 NA NA NA
2de0 1 Q9BYC5 100.0 0.0 X-RAY
 2006-12-26 LEU A:125 X:187 0.0 0.0 H -61.9 -35.0 0.0 0.0 0.0 HOH
 4.897
 CD1
 O
6vlf 1 Q9WTS2 96.07 0.0 X-RAY
 2020-02-26 LEU A:155 A:187 0.0 0.0 H -69.2 -42.8 0.0 0.0 0.0 HOH
 4.777
 CD1
 O
LEU B:155 B:187 0.0 0.0 H -67.2 -45.5 0.0 0.0 0.0 HOH
 4.856
 N
 O
6vlg 1 Q9WTS2 96.07 0.0 X-RAY
 2020-02-26 LEU A:155 A:187 0.0 0.0 H -68.4 -46.0 NA NA NA
LEU B:155 B:187 1.0 0.006 H -64.9 -48.7 NA NA NA
LEU C:155 C:187 0.0 0.0 H -64.6 -44.7 0.0 0.0 0.0 HOH
 5.271
 CD2
 O
LEU D:155 D:187 1.0 0.006 H -66.6 -40.4 NA NA NA
6vld 1 Q9BYC5 100.0 0.0 X-RAY
 2020-02-26 LEU A:83 A:187 0.0 0.0 H -67.6 -41.5 0.0 0.0 0.0 HOH
 4.542
 N
 O
LEU B:83 B:187 0.0 0.0 H -65.3 -36.3 NA NA NA
LEU C:83 G:187 1.0 0.006 H -62.9 -39.2 NA NA NA
LEU D:83 H:187 1.0 0.006 H -63.6 -41.1 1.0 0.006 0.0 HOH
 4.892
 CD1
 O
6vle 1 Q9BYC5 100.0 0.0 X-RAY
 2020-02-26 LEU A:83 A:187 0.0 0.0 H -70.5 -35.0 0.0 0.0 0.0 HOH
 4.991
 CD1
 O
LEU B:83 B:187 0.0 0.0 H -69.1 -41.9 0.0 0.0 0.0 HOH
 4.699
 CD1
 O
6tkv 1 Q9BYC5 100.0 0.0 X-RAY
 2020-01-29 LEU A:81 A:187 0.0 0.0 H -66.4 -43.1 NA NA NA
6x5s 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 LEU A:80 A:187 0.0 0.0 H -61.8 -47.8 0.0 0.0 0.0 HOH
 9.652
 CD1
 O
LEU B:80 B:187 0.0 0.0 H -62.7 -52.6 NA NA NA
6tkv 2 Q9BYC5 96.79 0.0 X-RAY
 2020-01-29 LEU B:80 B:187 0.0 0.0 H -65.9 -41.4 0.0 0.0 0.0 HOH
 4.686
 CD1
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q9byc5-f1 1 Q9BYC5 100.0 0.0 LEU A:187 A:187 0.0 0.0 H -65.6 -44.3