Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr14 66136154 . A C CCDS9775.1:NM_178155.2:c.791gAg>gCg_NP_835368.1:p.264E>A Homo sapiens fucosyltransferase 8 (FUT8), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6x5h 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 GLU A:224 A:264 120.0 0.632 S -90.8 -19.6 120.0 0.632 0.0 HOH
 2.426
 OE2
 O
GLU B:224 B:264 108.0 0.568 S -93.3 -17.1 NA NA NA
GLU C:224 C:264 119.0 0.626 S -92.2 -19.2 NA NA NA
GLU D:224 D:264 125.0 0.658 S -92.2 -18.8 NA NA NA
6x5r 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 GLU A:224 A:264 122.0 0.642 S -99.8 -19.3 NA NA NA
GLU B:224 B:264 118.0 0.621 S -98.6 -18.3 118.0 0.621 0.0 HOH
 2.364
 OE1
 O
6x5t 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 GLU A:224 A:264 113.0 0.595 S -96.8 -20.6 113.0 0.595 0.0 HOH
 6.395
 N
 O
GLU B:224 B:264 112.0 0.589 S -97.3 -20.9 112.0 0.589 0.0 HOH
 2.380
 OE1
 O
GLU C:224 C:264 112.0 0.589 S -95.3 -20.9 NA NA NA
GLU D:224 D:264 117.0 0.616 S -96.5 -19.9 NA NA NA
GLU E:224 E:264 116.0 0.611 S -96.7 -20.7 NA NA NA
GLU F:224 F:264 113.0 0.595 S -96.9 -21.1 NA NA NA
GLU G:224 G:264 121.0 0.637 S -96.6 -20.0 NA NA NA
GLU H:224 H:264 105.0 0.553 S -95.8 -21.8 NA NA NA
6x5u 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 GLU A:224 A:264 112.0 0.589 S -104.5 -17.4 112.0 0.589 0.0 HOH
 7.532
 OE1
 O
GLU B:224 B:264 110.0 0.579 S -105.8 -18.1 110.0 0.579 0.0 HOH
 6.798
 OE1
 O
GLU C:224 C:264 119.0 0.626 S -104.6 -17.1 NA NA NA
GLU D:224 D:264 124.0 0.653 S -105.8 -16.4 NA NA NA
GLU E:224 E:264 123.0 0.647 S -103.9 -17.6 NA NA NA
GLU F:224 F:264 113.0 0.595 S -104.6 -17.7 NA NA NA
GLU G:224 G:264 113.0 0.595 S -104.5 -17.2 NA NA NA
GLU H:224 H:264 129.0 0.679 S -105.1 -16.3 NA NA NA
2de0 1 Q9BYC5 100.0 0.0 X-RAY
 2006-12-26 GLU A:202 X:264 122.0 0.642 S -107.9 -21.4 122.0 0.642 0.0 HOH
 2.517
 OE2
 O
6vlf 1 Q9WTS2 96.07 0.0 X-RAY
 2020-02-26 GLU A:232 A:264 119.0 0.626 S -98.0 -17.3 119.0 0.626 0.0 HOH
 2.535
 OE1
 O
GLU B:232 B:264 117.0 0.616 S -94.1 -26.5 117.0 0.616 0.0 HOH
 2.614
 OE2
 O
6vlg 1 Q9WTS2 96.07 0.0 X-RAY
 2020-02-26 GLU A:232 A:264 115.0 0.605 S -87.7 -25.2 NA NA NA
GLU B:232 B:264 116.0 0.611 S -91.9 -28.9 NA NA NA
GLU C:232 C:264 114.0 0.6 S -95.6 -18.1 114.0 0.6 0.0 HOH
 2.657
 OE2
 O
GLU D:232 D:264 113.0 0.595 S -112.7 -15.1 NA NA NA
6vld 1 Q9BYC5 100.0 0.0 X-RAY
 2020-02-26 GLU A:160 A:264 116.0 0.611 S -102.5 -28.6 116.0 0.611 0.0 HOH
 3.377
 O
 O
GLU B:160 B:264 115.0 0.605 S -87.0 -20.7 NA NA NA
GLU C:160 G:264 113.0 0.595 S -92.2 -14.3 NA NA NA
GLU D:160 H:264 116.0 0.611 S -102.1 -16.0 116.0 0.611 0.0 HOH
 2.728
 OE1
 O
6vle 1 Q9BYC5 100.0 0.0 X-RAY
 2020-02-26 GLU A:160 A:264 114.0 0.6 S -101.4 -17.4 114.0 0.6 0.0 HOH
 3.949
 CG
 O
GLU B:160 B:264 118.0 0.621 S -104.7 -18.0 118.0 0.621 0.0 HOH
 3.195
 OE2
 O
6tkv 1 Q9BYC5 100.0 0.0 X-RAY
 2020-01-29 GLU A:158 A:264 123.0 0.647 S -95.4 -21.5 NA NA NA
6x5s 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 GLU A:157 A:264 115.0 0.605 S -89.3 -38.1 115.0 0.605 0.0
GLU B:157 B:264 114.0 0.6 S -90.0 -33.4 NA NA NA
6tkv 2 Q9BYC5 96.79 0.0 X-RAY
 2020-01-29 GLU B:157 B:264 118.0 0.621 S -98.3 -18.6 118.0 0.621 0.0 GOL
HOH
 4.521
2.340
 O
OE2
 C1
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q9byc5-f1 1 Q9BYC5 100.0 0.0 GLU A:264 A:264 120.0 0.632 S -89.3 -18.6