Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr14 66136177 . A C CCDS9775.1:NM_178155.2:c.814Atc>Ctc_NP_835368.1:p.272I>L Homo sapiens fucosyltransferase 8 (FUT8), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6x5h 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 ILE A:232 A:272 159.0 0.909 S -73.5 -22.8 159.0 0.909 0.0 HOH
 3.670
 C
 O
ILE B:232 B:272 156.0 0.891 S -75.5 -22.9 NA NA NA
ILE C:232 C:272 156.0 0.891 S -76.6 -22.4 NA NA NA
ILE D:232 D:272 153.0 0.874 S -75.0 -23.7 NA NA NA
6x5r 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 ILE A:232 A:272 163.0 0.931 S -70.7 -15.5 NA NA NA
ILE B:232 B:272 165.0 0.943 S -69.1 -15.4 165.0 0.943 0.0 HOH
 3.918
 CG1
 O
6x5t 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 ILE A:232 A:272 160.0 0.914 S -74.7 -26.3 160.0 0.914 0.0 HOH
 3.720
 CD1
 O
ILE B:232 B:272 160.0 0.914 S -73.7 -24.6 160.0 0.914 0.0 HOH
 3.356
 CD1
 O
ILE C:232 C:272 164.0 0.937 S -73.5 -23.6 NA NA NA
ILE D:232 D:272 158.0 0.903 S -74.0 -24.0 NA NA NA
ILE E:232 E:272 148.0 0.846 S -74.0 -25.7 NA NA NA
ILE F:232 F:272 160.0 0.914 S -73.3 -23.8 NA NA NA
ILE G:232 G:272 161.0 0.92 S -74.9 -25.4 NA NA NA
ILE H:232 H:272 162.0 0.926 S -75.0 -24.2 NA NA NA
6x5u 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 ILE A:232 A:272 162.0 0.926 S -71.2 -14.8 162.0 0.926 0.0
ILE B:232 B:272 160.0 0.914 S -69.5 -15.0 160.0 0.914 0.0 HOH
 5.191
 N
 O
ILE C:232 C:272 160.0 0.914 S -70.3 -15.7 NA NA NA
ILE D:232 D:272 160.0 0.914 S -70.4 -16.0 NA NA NA
ILE E:232 E:272 161.0 0.92 S -69.3 -16.7 NA NA NA
ILE F:232 F:272 165.0 0.943 S -69.5 -15.4 NA NA NA
ILE G:232 G:272 160.0 0.914 S -69.5 -15.9 NA NA NA
ILE H:232 H:272 162.0 0.926 S -69.3 -14.9 NA NA NA
2de0 1 Q9BYC5 100.0 0.0 X-RAY
 2006-12-26 ILE A:210 X:272 155.0 0.886 S -57.4 -23.2 155.0 0.886 0.0
6vlf 1 Q9WTS2 96.07 0.0 X-RAY
 2020-02-26 LEU A:240 A:272 167.0 0.982 S -94.9 -12.3 167.0 0.982 0.0 HOH
 2.779
 O
 O
LEU B:240 B:272 165.0 0.971 S -65.2 -48.3 165.0 0.971 0.0 HOH
 3.598
 CD2
 O
6vlg 1 Q9WTS2 96.07 0.0 X-RAY
 2020-02-26 LEU A:240 A:272 170.0 1.0 S -65.0 -17.6 NA NA NA
LEU B:240 B:272 167.0 0.982 S -62.3 -20.3 NA NA NA
LEU C:240 C:272 153.0 0.9 S -70.9 -23.9 153.0 0.9 0.0 HOH
 6.740
 N
 O
LEU D:240 D:272 155.0 0.912 S -69.8 -31.2 NA NA NA
6vld 1 Q9BYC5 100.0 0.0 X-RAY
 2020-02-26 ILE A:168 A:272 155.0 0.886 S -75.8 -23.1 155.0 0.886 0.0 HOH
 2.284
 O
 O
ILE B:168 B:272 155.0 0.886 S -66.2 -34.5 NA NA NA
ILE C:168 G:272 157.0 0.897 S -75.6 -42.3 NA NA NA
ILE D:168 H:272 154.0 0.88 S -92.0 -31.9 154.0 0.88 0.0 HOH
 2.643
 O
 O
6vle 1 Q9BYC5 100.0 0.0 X-RAY
 2020-02-26 ILE A:168 A:272 152.0 0.869 S -75.9 -21.3 152.0 0.869 0.0 HOH
 3.982
 N
 O
ILE B:168 B:272 156.0 0.891 S -85.1 -31.4 156.0 0.891 0.0 HOH
 2.725
 O
 O
6tkv 1 Q9BYC5 100.0 0.0 X-RAY
 2020-01-29 ILE A:166 A:272 159.0 0.909 S -77.5 -26.3 NA NA NA
6x5s 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 ILE A:165 A:272 163.0 0.931 S -73.6 -14.2 163.0 0.931 0.0
ILE B:165 B:272 159.0 0.909 S -71.8 -14.9 NA NA NA
6tkv 2 Q9BYC5 96.79 0.0 X-RAY
 2020-01-29 ILE B:165 B:272 161.0 0.92 S -94.8 -12.7 161.0 0.92 0.0 GOL
HOH
 3.796
2.672
 CD1
O
 C3
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q9byc5-f1 1 Q9BYC5 100.0 0.0 ILE A:272 A:272 159.0 0.909 S -70.4 -23.2