Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr14 66188513 . G A CCDS9775.1:NM_178155.2:c.856Gtt>Att_NP_835368.1:p.286V>I Homo sapiens fucosyltransferase 8 (FUT8), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
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auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6x5h 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 VAL A:246 A:286 28.0 0.181 -94.5 119.3 28.0 0.181 0.0 HOH
 3.626
 CG2
 O
VAL B:246 B:286 29.0 0.187 -94.7 117.1 NA NA NA
VAL C:246 C:286 29.0 0.187 -95.5 118.6 NA NA NA
VAL D:246 D:286 28.0 0.181 -95.1 119.7 NA NA NA
6x5r 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 VAL A:246 A:286 32.0 0.206 -86.6 117.9 NA NA NA
VAL B:246 B:286 30.0 0.194 -88.6 118.0 30.0 0.194 0.0 HOH
 3.556
 N
 O
6x5t 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 VAL A:246 A:286 30.0 0.194 -97.3 117.3 30.0 0.194 0.0 HOH
 3.661
 N
 O
VAL B:246 B:286 32.0 0.206 -98.0 117.9 32.0 0.206 0.0 HOH
 4.672
 CA
 O
VAL C:246 C:286 31.0 0.2 -98.7 118.5 NA NA NA
VAL D:246 D:286 33.0 0.213 -98.8 119.2 NA NA NA
VAL E:246 E:286 31.0 0.2 -97.4 118.3 NA NA NA
VAL F:246 F:286 30.0 0.194 -98.5 116.8 NA NA NA
VAL G:246 G:286 29.0 0.187 -98.3 117.6 NA NA NA
VAL H:246 H:286 34.0 0.219 -98.2 117.2 NA NA NA
6x5u 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 VAL A:246 A:286 28.0 0.181 -104.0 119.7 28.0 0.181 0.0
VAL B:246 B:286 31.0 0.2 -103.7 118.3 31.0 0.2 0.0
VAL C:246 C:286 31.0 0.2 -105.5 120.4 NA NA NA
VAL D:246 D:286 29.0 0.187 -103.3 119.8 NA NA NA
VAL E:246 E:286 30.0 0.194 -102.7 118.2 NA NA NA
VAL F:246 F:286 30.0 0.194 -104.4 120.1 NA NA NA
VAL G:246 G:286 31.0 0.2 -104.2 120.7 NA NA NA
VAL H:246 H:286 32.0 0.206 -105.5 121.2 NA NA NA
2de0 1 Q9BYC5 100.0 0.0 X-RAY
 2006-12-26 VAL A:224 X:286 34.0 0.219 -73.0 121.5 34.0 0.219 0.0
6vlf 1 Q9WTS2 96.07 0.0 X-RAY
 2020-02-26 ILE A:254 A:286 69.0 0.394 -106.1 121.4 69.0 0.394 0.0 EDO
HOH
 6.871
4.044
 CD1
CG1
 O1
O
ILE B:254 B:286 43.0 0.246 -99.6 119.9 43.0 0.246 0.0 HOH
 4.136
 CG1
 O
6vlg 1 Q9WTS2 96.07 0.0 X-RAY
 2020-02-26 ILE A:254 A:286 42.0 0.24 -98.3 124.0 NA NA NA
ILE B:254 B:286 46.0 0.263 -105.4 118.1 NA NA NA
ILE C:254 C:286 43.0 0.246 -99.8 121.0 43.0 0.246 0.0 HOH
 6.072
 CD1
 O
ILE D:254 D:286 43.0 0.246 -91.3 129.5 NA NA NA
6vld 1 Q9BYC5 100.0 0.0 X-RAY
 2020-02-26 VAL A:182 A:286 26.0 0.168 -99.7 115.3 26.0 0.168 0.0 HOH
 4.240
 N
 O
VAL B:182 B:286 36.0 0.232 -90.5 112.6 NA NA NA
VAL C:182 G:286 33.0 0.213 -92.7 110.9 NA NA NA
VAL D:182 H:286 30.0 0.194 -93.6 118.6 30.0 0.194 0.0 HOH
 3.874
 CG2
 O
6vle 1 Q9BYC5 100.0 0.0 X-RAY
 2020-02-26 VAL A:182 A:286 28.0 0.181 -84.7 113.4 28.0 0.181 0.0 HOH
 3.766
 N
 O
VAL B:182 B:286 30.0 0.194 -100.4 117.0 30.0 0.194 0.0 HOH
 3.759
 CG2
 O
6tkv 1 Q9BYC5 100.0 0.0 X-RAY
 2020-01-29 VAL A:180 A:286 30.0 0.194 -96.2 116.9 NA NA NA
6x5s 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 VAL A:179 A:286 30.0 0.194 -89.5 123.3 30.0 0.194 0.0
VAL B:179 B:286 32.0 0.206 -92.4 122.7 NA NA NA
6tkv 2 Q9BYC5 96.79 0.0 X-RAY
 2020-01-29 VAL B:179 B:286 30.0 0.194 -95.9 117.4 30.0 0.194 0.0 GOL
GOL
HOH
 4.852
8.908
3.955
 C
O
CG2
 O2
O2
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q9byc5-f1 1 Q9BYC5 100.0 0.0 VAL A:286 A:286 32.0 0.206 -83.3 121.5